EY758138

Overview
NameEY758138
Unique NameEY758138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_PIG (40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 7.158e-33
Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D VK    KELAPYD +W+Y RAAS AR +YLRGG GVGS  +IYGG +RNG+ P HFS+ S SVAR +L  L    ++  D  GG ++T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_HUMAN (40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 7.158e-33
Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D VK    KELAPYD +W+Y RAAS AR +YLRGG GVGS  +IYGG +RNG+ P HFS+ S SVAR +L  L    ++  D  GG ++T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_BOVIN (40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 7.158e-33
Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D VK    KELAPYD +W+Y RAAS AR +YLRGG GVGS  +IYGG +RNG+ P HFS+ S SVAR +L  L    ++  D  GG ++T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19B_SCHPO (40S ribosomal protein S19-B OS=Schizosaccharomyces pombe GN=rps19b PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 7.158e-33
Identity = 68/126 (53.97%), Postives = 85/126 (67.46%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            +VKDV   +F+ AYAA LKRSGK+  P W DIVKTGT KELAPYDPDWYY+RAA++AR IYLR  +GVG   ++YGG    G+RP H    SGSV R ++  L    ++     GG RI+ +G RD
Sbjct:    5 SVKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19A_SCHPO (40S ribosomal protein S19-A OS=Schizosaccharomyces pombe GN=rps19a PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.221e-32
Identity = 68/126 (53.97%), Postives = 85/126 (67.46%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            +VKDV   +F+ AYAA LKRSGK+  P W DIVKTGT KELAPYDPDWYY+RAA++AR IYLR  +GVG   ++YGG    G+RP H    SGSV R ++  L    ++     GG RI+ +G RD
Sbjct:    5 SVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_DICDI (40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.083e-32
Identity = 63/130 (48.46%), Postives = 89/130 (68.46%), Query Frame = 1
Query:   10 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDC-KGGMRITFRGPRD 396
            TA  +KDV P EF+  YA  LK++G++++P WNDI KT T +EL P +PDW Y R A++ARK+Y+RGG GV ++RR++GG +RNG+RP HF+  +G   R+ L  L +  ++  D  KGG  IT  G RD
Sbjct:    4 TAVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRD 133          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_ICTPU (40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.552e-32
Identity = 70/125 (56.00%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W DIVK    KELAP D +W+YIRAAS  R +YLRGG+GVGS  +IYGG KRNG+ P HFS  S +VAR +L  L    ++  D  GG R+T +G RD
Sbjct:    8 VKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRD 132          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_GILMI (40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.552e-32
Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D+VK G  KELAP D +W+YIRAAS  R +YLRGG GVGS  +IYGG +RNG+ P H+S+ S +VAR +L  L    ++  D  GG R+T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_PAGMA (40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.750e-31
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKDV+  EFV+A AA LK+SGK+++P W D+VK G  KELAP D +W+YIR+AS  R +YLRGG GVGS  +IYG  +RNG+ P H+S  S +VAR +L  L    ++  D  GG R+T +G RD
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_AEQIR (40S ribosomal protein S19 OS=Aequipecten irradians GN=RPS19 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.325e-30
Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            +VKDV  H F KA AA LK+SGK+++P W  I+K     EL+PYD DW+Y RAAS+ R +Y+R   GVG+  +IYG  KRNG  P H+ +SSGSVAR +L  L    ++  D  GG ++T +G +D
Sbjct:    4 SVKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKD 129          
The following BLAST results are available for this feature:
BLAST of EY758138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RS19_PIG7.158e-3355.2040S ribosomal protein S19 (Fragment) OS=Sus scrofa... [more]
RS19_HUMAN7.158e-3355.2040S ribosomal protein S19 OS=Homo sapiens GN=RPS19... [more]
RS19_BOVIN7.158e-3355.2040S ribosomal protein S19 OS=Bos taurus GN=RPS19 P... [more]
RS19B_SCHPO7.158e-3353.9740S ribosomal protein S19-B OS=Schizosaccharomyces... [more]
RS19A_SCHPO1.221e-3253.9740S ribosomal protein S19-A OS=Schizosaccharomyces... [more]
RS19_DICDI2.083e-3248.4640S ribosomal protein S19 OS=Dictyostelium discoid... [more]
RS19_ICTPU3.552e-3256.0040S ribosomal protein S19 OS=Ictalurus punctatus G... [more]
RS19_GILMI3.552e-3254.4040S ribosomal protein S19 OS=Gillichthys mirabilis... [more]
RS19_PAGMA8.750e-3152.8040S ribosomal protein S19 OS=Pagrus major GN=rps19... [more]
RS19_AEQIR3.325e-3048.4140S ribosomal protein S19 OS=Aequipecten irradians... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-F02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758138 ID=EY758138; Name=EY758138; organism=Citrus sinensis; type=EST; length=917bp
GAGATGGATACTGCAAAAAACGTGAAGGACGTGTCTCCCCACGAGTTCGT
CAAGGCCTACGCCGCCCATCTCAAGCGCTCCGGCAAGATTGAGCTTCCTA
CTTGGAACGACATCGTCAAGACTGGAACGTTGAAGGAGCTAGCCCCTTAT
GACCCCGATTGGTACTATATCAGGGCTGCTTCAATGGCGAGGAAGATCTA
CTTGAGGGGTGGTCTTGGTGTTGGTTCCTTCCGTAGAATCTATGGAGGGG
GGAAGAGGAACGGTATCCGCCCACCTCATTTCAGCAAGAGCAGCGGCTCT
GTTGCTCGTCACATACTTCACCATTTGGGGGACACGAACATCATGGTGCT
TGACTGCAAGGGTGGAATGAGAATCACATTCCGCGGGCCGCGGGATCCTT
GATCAATTTGCTGGGCGGATTGCCTCTGTTGCCCCTTGGGGGGTTATCTC
AATCCTTCAAAGGCGGGCTGGTTTTTAGTTGGGTGGCTGGATGGGGGTTT
GTTGTATAGACCCTGCGGCTGCGGCTCTAACTGTGTGTCTCGAACCTCGG
TGTATTGGTTTCCGTCATCTTTACTATCACTTACACTAATAATAATTAAA
GGTATGCGGTGTTGAGAGTCGTTCTTTGGATATCTTTGTTGGTTATTTTA
CCTTCTTTTTTTGTTCCCATAACTTTTAATTGGTCTTTCGTTATAAGCTG
GGAATGGTTAAAACACTCTCTTTCTCCCTGCGGGCGAGTAGGCGGGTCTG
TTTCGCGATGGGGGGTGCGTGTCTTTTCTCTCTCCTTTTTCTTTACACAA
TCTTTTCGTTGTTGCGCACTGGATCCTTTATTTCAGACGTGTTTGCTGCG
GGGAGGTAGATAAGCACATGAGTCTTTGTATTGTTATGGGTGTGAGATCG
ACGGTAATGTATAATAA
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