EY758138

Overview
NameEY758138
Unique NameEY758138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19S_ASCSU (40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.815e-29
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHL 327
            +VKDV  HE V+  A  LK+SGK+++P W+D+VK G  KELAP D DWYY+R AS+AR++Y+R   GVG+ RR+YGG KR G+ P HF+++SGSV R  L  L
Sbjct:    6 SVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTL 108          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_ENTHI (40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            N+KDV   +F+KAYA HLK+SGK+E+P W D VKTG  KELAP +PDW YIRAA++ARK+YL  G+GV + RR YG        P H +  SG V R+IL  L    I V   + G  +T  G +D
Sbjct:    6 NIKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGI-VGKIQSGRSLTKEGRKD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19A_DROME (40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 58/125 (46.40%), Postives = 78/125 (62.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VKD+  H   KA A  LK++GK+++P   DIVKT   KELAPYDPDW+Y+R AS+ R +Y R   GVGS  +IYGG KRNG+ P HF +++   AR  L  L    ++     GG +++  G RD
Sbjct:    6 VKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_EMENI (40S ribosomal protein S19 OS=Emericella nidulans GN=rps19 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.869e-27
Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLD-CKGGMRITFRGPRD 396
            V+DV   +F+ AYAA LKR GK+ +P W D VKT    EL P D DWYY+RAA++AR IYLR  +GVG  R+++G  K  G RP H   +SG+V R +L  L    ++  D  KGG RIT  G RD
Sbjct:    6 VRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRD 131          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19G_ASCSU (40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.665e-27
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 1
Query:    4 MDTAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHL 327
            M  A +VKDV  HE V+  A  LK+SGK+++P W+D+ K G  KELAP + DWYY+R AS+AR++Y+R   GV + R +YGG KR G+ P HF+K+SGSV R  L  L
Sbjct:    1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTL 108          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19_CAEEL (40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.308e-26
Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 1
Query:    4 MDTAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHL 327
            M  A ++KDV  HE  K+ A  LK+SGK+++P W+D+VK G  KELAP DPDW+Y RAAS+AR +Y R   G+G+F+++YGG KR G+ P HF  S+G+  R  +  L
Sbjct:    1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQL 107          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19B_YEAST (40S ribosomal protein S19-B OS=Saccharomyces cerevisiae GN=RPS19B PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.370e-25
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            +V+DV+  +F+ AYA+ L+R GK+E+P + DIVKT +  E+ P D + W+Y RAAS+AR IY+R  +GVG   ++YGG K  G+RP     +SGS+ R +L  L    I+ +  KGG RI+  G RD
Sbjct:    5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRD 131          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19A_YEAST (40S ribosomal protein S19-A OS=Saccharomyces cerevisiae GN=RPS19A PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.370e-25
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 1
Query:   19 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            +V+DV+  +F+ AYA+ L+R GK+E+P + DIVKT +  E+ P D + W+Y RAAS+AR IY+R  +GVG   ++YGG K  G+RP     +SGS+ R +L  L    I+ +  KGG RI+  G RD
Sbjct:    5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRD 131          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19B_DROME (40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 5.685e-22
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIMVLDCKGGMRITFRGPRD 396
            VK++  H   K  AA LK+SGKI +P     +KTG  KE AP D DW+Y R AS+ R +YLR   GVG+F ++Y G KRNG+RP    +SS    R  L  L   N++     GG ++T +G R+
Sbjct:    6 VKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRN 130          
BLAST of EY758138 vs. ExPASy Swiss-Prot
Match: RS19E_METTH (30S ribosomal protein S19e OS=Methanobacterium thermoautotrophicum GN=rps19e PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.920e-18
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 1
Query:   22 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGIRPPHFSKSSGSVARHILHHLGDTNIM 345
            V DV     +   A  LK   K++ P W + VKTG  KE  P +PDW+Y+RAA++ R++Y+ G +GV S R  YGG K  G RP  F + SG++ R  L  L ++ ++
Sbjct:    4 VYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLI 111          
The following BLAST results are available for this feature:
BLAST of EY758138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RS19S_ASCSU2.815e-2955.3440S ribosomal protein S19S OS=Ascaris suum GN=RPS1... [more]
RS19_ENTHI3.441e-2750.0040S ribosomal protein S19 OS=Entamoeba histolytica... [more]
RS19A_DROME3.441e-2746.4040S ribosomal protein S19a OS=Drosophila melanogas... [more]
RS19_EMENI5.869e-2749.2140S ribosomal protein S19 OS=Emericella nidulans G... [more]
RS19G_ASCSU7.665e-2751.8540S ribosomal protein S19G OS=Ascaris suum GN=RPS1... [more]
RS19_CAEEL1.308e-2650.0040S ribosomal protein S19 OS=Caenorhabditis elegan... [more]
RS19B_YEAST9.370e-2544.8840S ribosomal protein S19-B OS=Saccharomyces cerev... [more]
RS19A_YEAST9.370e-2544.8840S ribosomal protein S19-A OS=Saccharomyces cerev... [more]
RS19B_DROME5.685e-2243.2040S ribosomal protein S19b OS=Drosophila melanogas... [more]
RS19E_METTH2.920e-1839.8130S ribosomal protein S19e OS=Methanobacterium the... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-F02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758138 ID=EY758138; Name=EY758138; organism=Citrus sinensis; type=EST; length=917bp
GAGATGGATACTGCAAAAAACGTGAAGGACGTGTCTCCCCACGAGTTCGT
CAAGGCCTACGCCGCCCATCTCAAGCGCTCCGGCAAGATTGAGCTTCCTA
CTTGGAACGACATCGTCAAGACTGGAACGTTGAAGGAGCTAGCCCCTTAT
GACCCCGATTGGTACTATATCAGGGCTGCTTCAATGGCGAGGAAGATCTA
CTTGAGGGGTGGTCTTGGTGTTGGTTCCTTCCGTAGAATCTATGGAGGGG
GGAAGAGGAACGGTATCCGCCCACCTCATTTCAGCAAGAGCAGCGGCTCT
GTTGCTCGTCACATACTTCACCATTTGGGGGACACGAACATCATGGTGCT
TGACTGCAAGGGTGGAATGAGAATCACATTCCGCGGGCCGCGGGATCCTT
GATCAATTTGCTGGGCGGATTGCCTCTGTTGCCCCTTGGGGGGTTATCTC
AATCCTTCAAAGGCGGGCTGGTTTTTAGTTGGGTGGCTGGATGGGGGTTT
GTTGTATAGACCCTGCGGCTGCGGCTCTAACTGTGTGTCTCGAACCTCGG
TGTATTGGTTTCCGTCATCTTTACTATCACTTACACTAATAATAATTAAA
GGTATGCGGTGTTGAGAGTCGTTCTTTGGATATCTTTGTTGGTTATTTTA
CCTTCTTTTTTTGTTCCCATAACTTTTAATTGGTCTTTCGTTATAAGCTG
GGAATGGTTAAAACACTCTCTTTCTCCCTGCGGGCGAGTAGGCGGGTCTG
TTTCGCGATGGGGGGTGCGTGTCTTTTCTCTCTCCTTTTTCTTTACACAA
TCTTTTCGTTGTTGCGCACTGGATCCTTTATTTCAGACGTGTTTGCTGCG
GGGAGGTAGATAAGCACATGAGTCTTTGTATTGTTATGGGTGTGAGATCG
ACGGTAATGTATAATAA
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