CX300823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.294e-26 Identity = 53/115 (46.09%), Postives = 78/115 (67.83%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 +VA+I+++ Y +WNLFSGF+I ++PI+WRWY W P+AW+LYGL SQFG D + + DGT PVK +++ F F+H +L + ++VAF +FA +F +AI FQKR Sbjct: 1355 HVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFG--DIMTPMDDGT---PVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.420e-26 Identity = 50/115 (43.48%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 ++A+++++ Y +WNLFSGF+I +P++W WYYW P+AW+LYGL SQFGD + ++ VK +++ +G+R FL + AM V F +FA+IFA IK+F FQKR Sbjct: 1313 HIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGD----ITEPMADSNMSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.385e-26 Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 ++AAII++ Y +WNLFSG++I +IP++WRWY W P+AW+LYGL SQFGD +++ T V + D FGF H+FL + + V FA FA +F++AI F FQ+R Sbjct: 1340 SIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLEGDTRT----VAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR 1450
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25 Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 +AAI+ + WNLFSGF+I IP++WRWYYWA+P+AW++YG+ SQ GD ++L+ T + V LK+ G+ HDFL++ V + +F +FAY IK +QKR Sbjct: 1348 IAAIVMSFFLSFWNLFSGFLIPRPLIPVWWRWYYWASPVAWTIYGIFASQVGDRTDELELTGETEKIQVNEFLKEYLGYDHDFLLVVVFAHVGWVLLFFFVFAYGIKFLNYQKR 1461
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.186e-25 Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 VA+I A+ Y ++NLFSGF I +IP +W WYYW P+AW++YGL TSQ+GD + + L G + VK +KD +GF D++ ++V F FA IFA+ IK FQ R Sbjct: 1329 VASIFASAFYGIFNLFSGFFIPRPKIPKWWVWYYWICPVAWTIYGLITSQYGDVETPIALLGGAPGLTVKQYIKDQYGFESDYMGPVAGVLVGFTVFFAFIFAFCIKTLNFQSR 1442
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.271e-25 Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 VA+I A+ Y ++NLFSGF I +IP +W WYYW P+AW++YGL SQ+GD + +++ G + VK ++D +GF+ DF+ A+++AF FA IFA+ I+ FQ R Sbjct: 1356 VASIFASAFYGIFNLFSGFFIPRPKIPKWWIWYYWICPVAWTVYGLIVSQYGDVETRIQVLGGAPDLTVKQYIEDHYGFQSDFMGPVAAVLIAFTVFFAFIFAFCIRTLNFQTR 1469
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24 Identity = 48/115 (41.74%), Postives = 75/115 (65.22%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 +VA+I+++ Y +WNLF+GF+I+ P++WRWY W P+AW+LYGL SQ+G D + + DG +PV +++ F F+H +L ++VAF +FA +F +AI FQKR Sbjct: 1359 HVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAWTLYGLIVSQYG--DIVTPMDDG---IPVNVFVENYFDFKHSWLGFVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.748e-23 Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 +AA++ + WN F+GF+I IP++WRW+YWANP++W++YG+ SQF D D++V + + ++ VK L+ GF+HDFL + IF +F Y IK FQKR Sbjct: 1341 LAAVLVSFVLSSWNNFAGFIIPRPLIPVWWRWFYWANPVSWTIYGVIASQFADSDRVVTVPGQSTTMVVKDFLEKNMGFKHDFLGYVVLAHFGYVIIFFFLFGYGIKCLNFQKR 1454
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.748e-23 Identity = 48/114 (42.11%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 VA+I+ A Y L+NLFSGF I +IP +W WYYW P+AW++YGL SQ+GD + + + G V+ +KD FG+ DF+ + A++ F FA +AY+I+ FQ+R Sbjct: 1397 VASILGAAFYTLFNLFSGFFIPRPKIPKWWVWYYWLCPVAWTVYGLIVSQYGDVEDFITV-PGQSDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.644e-23 Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 VAA+ A Y L+NLFSGF+I RIP +W WYYW P+AW++YGL SQ+GD + +K+ +K +++ +G+ DF++ ++V F FA +FA+ I+ FQ+R Sbjct: 1303 VAAVFAGAFYGLFNLFSGFVIPRPRIPKWWIWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFFAFMFAFGIRTLNFQQR 1416 The following BLAST results are available for this feature:
BLAST of CX300823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300823 ID=CX300823; Name=CX300823; organism=Citrus sinensis; type=EST; length=427bpback to top |