CN189702

Overview
NameCN189702
Unique NameCN189702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.143e-67
Identity = 114/157 (72.61%), Postives = 136/157 (86.62%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQ R+F+YADT RHRLGPNY+ LPVNAPKCA HNN YDG+MNF+HRDEE+DYFPS++D  R+AE  PTP  I  G+R+KC+I KENNFKQPG+RYRSWAPDRQ+RFI RWV ALS+PRVTHEIR  WISY +QA +SLGQK+ASRLN+RP +
Sbjct:  336 SDDKMLQARVFAYADTHRHRLGPNYMLLPVNAPKCAHHNNSYDGYMNFVHRDEEVDYFPSKFDNTRNAERFPTPLRIVTGQRDKCVIEKENNFKQPGDRYRSWAPDRQDRFINRWVKALSEPRVTHEIRSTWISYLTQADRSLGQKVASRLNIRPTM 492          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.547e-67
Identity = 117/159 (73.58%), Postives = 138/159 (86.79%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALS--DPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQTR+FSYAD+QRHRLGPNYLQLPVNAPK + HNNH++GFMN +HRDEE++YFPSR+D VRHAE  P P      RREKC IPK+N+FKQ GERYR+WAPDRQERF+ RWV+ALS  DPR+THEIR IW+SYWSQA +SLGQKLAS LN+RP+I
Sbjct:  336 SDDKMLQTRVFSYADSQRHRLGPNYLQLPVNAPKWSHHNNHHEGFMNAIHRDEEVNYFPSRHDTVRHAERVPIPTTHLSARREKCNIPKQNHFKQAGERYRTWAPDRQERFLRRWVEALSDTDPRITHEIRSIWVSYWSQADRSLGQKLASHLNMRPSI 494          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 254.988 bits (650), Expect = 2.547e-67
Identity = 119/157 (75.80%), Postives = 133/157 (84.71%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DKLLQTRIFSY+DTQRHRLGPNYL LP NAPKCA HNNHYDG MNFMHR EE+DYFPSRYD VR+A  +P P     GRREK +I KENNFKQPGERYR+  P RQERFI RWVDALSDPR+THEIR IW+S WSQA +SLGQKLASRL+ +P++
Sbjct:  335 SDDKLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCAHHNNHYDGSMNFMHRHEEVDYFPSRYDAVRNAPRYPIPTAHIAGRREKTVISKENNFKQPGERYRAMDPARQERFITRWVDALSDPRLTHEIRTIWLSNWSQADRSLGQKLASRLSAKPSM 491          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.156e-66
Identity = 114/157 (72.61%), Postives = 130/157 (82.80%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKC  HNNH DG MN  HRDEE+DY PSR+DP R AE +P P  +  GRR  C+IPKENNFKQ GERYRSW PDRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  336 SEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.070e-65
Identity = 113/157 (71.97%), Postives = 129/157 (82.17%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKC  HNNH DG MN  HRDEE+DY PSR+DP R AE +P P  +  GRR  C+IPKENNFKQ GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  336 SEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.113e-65
Identity = 113/157 (71.97%), Postives = 129/157 (82.17%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKC  HNNH DG MN  HRDEE+DYFPSR+DP R AE +P P  +  GRR  C+IPKENN KQ GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  336 SEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.497e-59
Identity = 104/157 (66.24%), Postives = 129/157 (82.17%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKCA HNNHYDG MNFMHRDEE+DY+PSR+ P+RHA   P  P    GRR+K  I K+N+FKQPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  336 SDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.497e-59
Identity = 104/157 (66.24%), Postives = 129/157 (82.17%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKCA HNNHYDG MNFMHRDEE+DY+PSR+ P+RHA   P  P    GRR+K  I K+N+FKQPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  336 SDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.389e-57
Identity = 103/159 (64.78%), Postives = 128/159 (80.50%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKC   NNHYDG MNFMHRDEE+DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+ R+ DAL+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  336 SDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 6.507e-55
Identity = 98/158 (62.03%), Postives = 123/158 (77.85%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRH-AEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQ R+F+YADTQR+RLGPNYL LPVNAP+CA HNNHYDG MNFMHRDEE+DY+PSR+ P+R  A   P PP    GRREK  I K N+FKQPGERYRSW  DRQ+RF+ R+ D+L  P+V+ E+R IWI   ++   SLG K+A+RLN++ N+
Sbjct:  339 SDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPRCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVSQELRSIWIDLLAKCDASLGMKIATRLNMKANM 496          
The following BLAST results are available for this feature:
BLAST of CN189702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CATA_IPOBA1.143e-6772.61Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA_PEA2.547e-6773.58Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA2_MAIZE2.547e-6775.80Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA1_SOLLC2.156e-6672.61Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA2_SOLTU1.070e-6571.97Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLTU3.113e-6571.97Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA1_ORYSJ1.497e-5966.24Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI1.497e-5966.24Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU2.389e-5764.78Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA3_MAIZE6.507e-5562.03Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189702 ID=CN189702; Name=CN189702; organism=Citrus sinensis; type=EST; length=661bp
CTTTGACGTAACCAGCATTTATTTTAAGGAACATCATGTTTATGAATTAC
AGGACCAACATGTTTTTTTTAGTATTACAAAATAACACACCACCCGAAAA
CGAATTCGCATTCCTTAAACTGCTGACGTCCTCTGTGTTTACTCCTTGCT
AACTCTTTCTAAATCACTCAGCTCCGCATCACCATTAAATGTTAGGCCTC
ACATTCAGACGAGATGCCAACTTCTGACCCAGAGACTTGCAAGCCTGAGA
CCAGTATGAGATCCATATGTGGCGGATCTCATGGGTGACGCGTGGATCAG
ATAAAGCATCAACCCATCTGCAGATGAATCGCTCTTGCCTGTCTGGTGCC
CAAGATCGGTATCTCTCTCCAGGTTGTTTGAAGTTGTTTTCCTTTGGAAT
TATGCACTTCTCGCGCCTTCCGCCGCAGATTTCAGGAGGAGTTGGATGCA
TCTCAGCATGACGGACAGGATCATACCTTGAAGGGAAGTAATCGATCTCC
TCATCCCTGTGCATGAAATTCATGAAACCGTCATAATGATTGTTGTGCTG
AGCACATTTGGGTGCATTTACTGGGAGTTGAAGATAGTTCGGCCCTAGAC
GGTGCCTCTGAGTATCAGCATAGGAGAAGATTCGAGTCTGGAGCAACTTA
TCATTTGAAAT
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