CN189702

Overview
NameCN189702
Unique NameCN189702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.663e-53
Identity = 99/159 (62.26%), Postives = 123/159 (77.36%), Query Frame = -1
Query:  188 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 658
            S+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKC    NHYDG MNFMHRDEE+DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+      L+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  335 SDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKKNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVA-LRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18
Identity = 53/133 (39.85%), Postives = 72/133 (54.14%), Query Frame = -1
Query:  266 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD--PVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHI 658
            S D+LLQ R+FSY+DTQRHR+GPNYLQLP+N+PK    NN  DG M F  +   I+Y P+ YD  P  +        EI G    + I  K NNF    E +  ++   +   +   VD  S  R   +IR++
Sbjct:  326 SEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPKENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRYSNAERAALVKNIVDDWSQVREDIKIRNL 458          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.186e-18
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = -1
Query:  266 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRY--DPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHI 658
            S D+LLQ R+FSY+DTQRHR+GPNYLQLP+N+PK    NN  DG+M F  +   I+Y P+ Y  +P  +        EI G    + I  K NNF    E +  ++   +   +   VD  S  R   +IR++
Sbjct:  326 SEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGYMPFKQQTSSINYEPNSYETEPKENPAFIEQEQEIRGDISGRLIAEKPNNFGHAKEVWDRYSDAERAALVKNIVDDWSGVRDDIKIRNL 458          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.729e-18
Identity = 57/150 (38.00%), Postives = 88/150 (58.67%), Query Frame = -1
Query:  215 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEI-CGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTH-EIRHIWISYWSQACKSLGQKLA 658
            S D+LLQ R+FSYADTQ +RLG   L LPVN PK A +N + DG +N  H    ++Y PSR +P R A+      E+   G  ++  I +E NFKQ G+ +RS++   +   + R+ ++L+D   TH E ++I +S   +  +  G ++A
Sbjct:  346 SEDRLLQGRVFSYADTQMYRLGAIGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEP-RPADDKARYSELPLSGTTQQAKITREQNFKQAGDLFRSYSAKEKTDLVQRFGESLAD---THTESKNIMLSVLYKEDRHYGTRVA 491          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17
Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = -1
Query:  266 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD--PVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHI 658
            S D++LQ R+FSY+DTQRHR+GPNYLQLP+N+PK    NN  DG M F  +   I+Y P+ YD  P  +        EI G    + +  K NNF    E ++ ++   +   +   VD     R   +IR++
Sbjct:  326 SEDRVLQGRLFSYSDTQRHRVGPNYLQLPINSPKTPVDNNQRDGQMPFKQQTSSINYEPNSYDTEPKENPAYIEPEQEIRGDISGRLVAEKPNNFGHAKEVWKRYSDAERAALVKNIVDDWEGVREDIKIRNL 458          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.185e-17
Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = -1
Query:  215 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLA 658
            S D+LLQ R+F+YADTQ +R+G N L LPVN P+   +  + DG +N  H    ++Y PSR DP               G  ++  I +E NFKQ GE +RS+    Q   I     AL+      E ++I +SY+ +A    G  LA
Sbjct:  349 SEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRSYGKKDQADLIASLGGALA--ITDDESKYIMLSYFYKADSDYGTGLA 494          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.490e-16
Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = -1
Query:  197 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFM-----NFMHRDEEIDYFPSRYDPVRHAEMH-PTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVR 658
            S+DK+LQ R FSY+DTQR+R+GPNYLQLP+NAPK     N  DG M      F  +D+ ++Y PS     + A    P       G   +  I + N F Q G +YR++A   ++  +     AL+   V   I+   + Y++ A    GQ++   +  +
Sbjct:  357 SDDKMLQGRTFSYSDTQRYRVGPNYLQLPINAPKKHVATNQRDGQMAYRVDTFEGQDQRVNYEPSLLSGPKEAPRRAPEHTPRVEGNLVRAAIERPNPFGQAGMQYRNFADWERDELVSNLSGALAG--VDKRIQDKMLEYFTAADADYGQRVREGIQAK 514          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.267e-14
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = -1
Query:  206 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFM-----HRDEEIDYFPSRYDPVRHAEM--HPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRL 658
            S+DKLLQ R F+Y+DTQR+R+G NYLQLP+N+PK     N   G M +       ++  ++Y PS    ++ A+       P + G  + +  I + NNF Q GE YR +    +   I   V+ LS  R   EI+   I  +++A    G+++A  L
Sbjct:  359 SDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDRAEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREA-IDRTNNFGQAGETYRRFTEFERNELITNLVNTLSTCR--KEIQDQMIENFTKADPDYGKRVAEGL 513          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.267e-14
Identity = 56/161 (34.78%), Postives = 81/161 (50.31%), Query Frame = -1
Query:  191 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP---KCAQHNNHYDGFMNFM-HRDEEIDYFPSRY-DPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 658
            S DK+LQ R+FSY DT RHRLG NY Q+PVN P   K    N   DGFM    +  +  +Y P+ +  P  H E      ++ G    +      ++F QPG+ YR  + D + RF+   V  +S   +  EI+   +S + +A K LG +L   L +  N
Sbjct:  326 SPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLVGHMSGVTI-KEIQVRAVSNFYKADKDLGARLCKGLGIDVN 485          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = -1
Query:  203 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRH-AEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVT-HEIRHIWISYWSQACKSLGQKLASRLN 658
            S D+LLQ R+F+YADTQ +RLG N  QLP+N P    ++++ +G  N      +I+Y PSR   ++   +      ++ G  ++K  I    NF Q G  YRS     ++  I      L+  +VT  EI+   +S++ +A K  G +LA   N
Sbjct:  341 SEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQTQLVGSVQQKA-ISNPRNFYQAGVLYRSLNEQDKQDLITNLXGBLN--KVTDKEIKATMVSHFYRADKDYGTRLARATN 491          
The following BLAST results are available for this feature:
BLAST of CN189702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CATA_SECCE4.663e-5362.26Catalase OS=Secale cereale PE=2 SV=1[more]
CATA_LISMO1.674e-1839.85Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATA_LISIN2.186e-1839.10Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATB_PSESY3.729e-1838.00Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_LISSE1.085e-1737.59Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATB_PSEAE9.185e-1736.49Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_DEIRA3.490e-1633.75Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATX_BACSU3.267e-1434.18Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATA_DICDI4.267e-1434.78Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_VIBCH8.047e-1333.12Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189702 ID=CN189702; Name=CN189702; organism=Citrus sinensis; type=EST; length=661bp
CTTTGACGTAACCAGCATTTATTTTAAGGAACATCATGTTTATGAATTAC
AGGACCAACATGTTTTTTTTAGTATTACAAAATAACACACCACCCGAAAA
CGAATTCGCATTCCTTAAACTGCTGACGTCCTCTGTGTTTACTCCTTGCT
AACTCTTTCTAAATCACTCAGCTCCGCATCACCATTAAATGTTAGGCCTC
ACATTCAGACGAGATGCCAACTTCTGACCCAGAGACTTGCAAGCCTGAGA
CCAGTATGAGATCCATATGTGGCGGATCTCATGGGTGACGCGTGGATCAG
ATAAAGCATCAACCCATCTGCAGATGAATCGCTCTTGCCTGTCTGGTGCC
CAAGATCGGTATCTCTCTCCAGGTTGTTTGAAGTTGTTTTCCTTTGGAAT
TATGCACTTCTCGCGCCTTCCGCCGCAGATTTCAGGAGGAGTTGGATGCA
TCTCAGCATGACGGACAGGATCATACCTTGAAGGGAAGTAATCGATCTCC
TCATCCCTGTGCATGAAATTCATGAAACCGTCATAATGATTGTTGTGCTG
AGCACATTTGGGTGCATTTACTGGGAGTTGAAGATAGTTCGGCCCTAGAC
GGTGCCTCTGAGTATCAGCATAGGAGAAGATTCGAGTCTGGAGCAACTTA
TCATTTGAAAT
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