CN189702

Overview
NameCN189702
Unique NameCN189702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12
Identity = 54/161 (33.54%), Postives = 76/161 (47.20%), Query Frame = -1
Query:  200 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVR--------HAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 658
            S D+LLQ R+F+YADTQ +RLG N  QLPVN+PK    N++ DG  N       +D     Y+P R         A    TP     G  ++  I    +F Q G  YRS +   +   I      L+      E++ I +SY+ +A K  G +LA   +V
Sbjct:  341 SEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRSLSEQDKADLIHNLSGDLNKVN-DAEVKAIMVSYFYRADKEYGTRLAKATDV 497          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12
Identity = 54/161 (33.54%), Postives = 76/161 (47.20%), Query Frame = -1
Query:  200 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVR--------HAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 658
            S D+LLQ R+F+YADTQ +RLG N  QLPVN+PK    N++ DG  N       +D     Y+P R         A    TP     G  ++  I    +F Q G  YRS +   +   I      L+      E++ I +SY+ +A K  G +LA   +V
Sbjct:  341 SEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRSLSEQDKADLIHNLSGDLNKVN-DAEVKAIMVSYFYRADKEYGTRLAKATDV 497          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12
Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = -1
Query:  215 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMH-RDEEIDYFPSR-YDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLA 658
            S D+LLQ R+F+YADTQ +RLG N  QLPVN P  + +N++ +G  N     + +++Y PSR  +     +      ++ G  ++K  I K  +F Q G  YRS     +   I      L+   +  +I+   +SY+ +A K  G +LA
Sbjct:  341 SEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLTSVNNHNQNGLSNNAQLSNGDVNYEPSRKLNLAEDNQFKAVETKLVGTVQQKA-ISKPRDFYQAGVLYRSMNEQDRSDLIANLAGDLNKV-IDKDIKATMVSYFYRADKEYGSRLA 488          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12
Identity = 52/164 (31.71%), Postives = 79/164 (48.17%), Query Frame = -1
Query:  191 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPK--ENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 658
            S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M F+  ++     Y+P+          H  PP    G   +    +  +N F+QPG+ +R  + D +ER      +A+       ++RHI   Y  +A    G+ +A  L++  N
Sbjct:  327 SPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSRDGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDGDGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMDGVSKDVKVRHIRHCY--KADPEYGKGVAKALDIDIN 488          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 52/164 (31.71%), Postives = 78/164 (47.56%), Query Frame = -1
Query:  191 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPK--ENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 658
            S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M F+  ++     Y+P+          H  PP    G   +    +  +N F+QPG+ +R  + D +ER      +A+       ++RHI   Y  +A    G+ +A  L +  N
Sbjct:  327 SPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSRDGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDGDGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMDGVSKDVKVRHIRHCY--KADPEYGKGVAKALGIDIN 488          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 52/164 (31.71%), Postives = 78/164 (47.56%), Query Frame = -1
Query:  191 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPK--ENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 658
            S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M F+  ++     Y+P+          H  PP    G   +    +  +N F+QPG+ +R  + D +ER      +A+       ++RHI   Y  +A    G+ +A  L +  N
Sbjct:  327 SPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSRDGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDGDGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMDGVSKDVKVRHIRHCY--KADPEYGKGVAKALGIDIN 488          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11
Identity = 48/133 (36.09%), Postives = 60/133 (45.11%), Query Frame = -1
Query:  266 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNF-MHRDEEIDYFPSRYDPVRHAEMHPTPP-EICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHI 658
            S DK+LQ R+FSY D  R+RLG N+ Q+PVNAPKC  HN H DG M    +    I Y P+     +       PP  I G          E+ F QP   Y   + D  +R   R    LS      + R I
Sbjct:  325 SPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQASKETQQRQI 457          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11
Identity = 51/158 (32.28%), Postives = 79/158 (50.00%), Query Frame = -1
Query:  200 ISNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHY-DGFMNF-MHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKEN-NFKQPGERYRSWAPD-RQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 661
            IS DK+LQ R+FSY DT  HRLGPNY  +PVNAPK +  N++  DGFM    +     +Y+P+ +       ++  PP    G   + +    N +F Q G  YR    D  +E  +   V  LS  +   ++R   + +  +A +  G ++A  L +
Sbjct:  328 ISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFMRVDANGGSGPNYWPNSFGGPSPDSVYLEPPFGVSGLAARTLYTHPNDDFVQAGNLYRDVMTDYDRENLVGNIVSHLSAAQKRIQLRQTALFF--KADRDYGSRVAKGLEL 483          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = -1
Query:  371 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDGFMNFMHRDEEIDYFPS--RYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQP 658
            S DK+LQ RIFSY DT  HRLGPNY+QLPVN P +   HN   DG M + ++    ++FP+   Y   R      T P    G  ++     +NN+ QP
Sbjct:  342 SPDKMLQGRIFSYTDTHFHRLGPNYIQLPVNCPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVKDTTFP--ATGDVDRYESGDDNNYDQP 438          
BLAST of CN189702 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11
Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = -1
Query:  191 SNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSRYDPVRHAEMHPTP--PEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 658
            S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M F+  ++     Y+P+     +    +  P  P    G         +N F+QPG+ +R  + D +ER      +A+    V+ +++H  I +  +A    G+ +A  L +  N
Sbjct:  327 SPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENMCPFSRDGQMRFLDGNQGGGPHYYPNNKGVYQSQPEYKKPAFPVDGDGYEYNQRQDDDNYFEQPGKLFRLQSDDAKERIFTNTANAMDG--VSEDVKHRHIRHCYKADPEYGKGVAKALEIDIN 488          
The following BLAST results are available for this feature:
BLAST of CN189702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CATA_VIBVY3.993e-1233.54Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA_VIBVU3.993e-1233.54Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATA_VIBPA3.993e-1232.67Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_STAEP5.216e-1231.71Catalase OS=Staphylococcus epidermidis GN=katA PE=... [more]
CATA_STAES6.812e-1231.71Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ6.812e-1231.71Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_PROMI1.518e-1136.09Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_METBF3.381e-1132.28Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA1_CAEEL3.381e-1141.41Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA_STAHJ4.415e-1130.49Catalase OS=Staphylococcus haemolyticus (strain JC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189702 ID=CN189702; Name=CN189702; organism=Citrus sinensis; type=EST; length=661bp
CTTTGACGTAACCAGCATTTATTTTAAGGAACATCATGTTTATGAATTAC
AGGACCAACATGTTTTTTTTAGTATTACAAAATAACACACCACCCGAAAA
CGAATTCGCATTCCTTAAACTGCTGACGTCCTCTGTGTTTACTCCTTGCT
AACTCTTTCTAAATCACTCAGCTCCGCATCACCATTAAATGTTAGGCCTC
ACATTCAGACGAGATGCCAACTTCTGACCCAGAGACTTGCAAGCCTGAGA
CCAGTATGAGATCCATATGTGGCGGATCTCATGGGTGACGCGTGGATCAG
ATAAAGCATCAACCCATCTGCAGATGAATCGCTCTTGCCTGTCTGGTGCC
CAAGATCGGTATCTCTCTCCAGGTTGTTTGAAGTTGTTTTCCTTTGGAAT
TATGCACTTCTCGCGCCTTCCGCCGCAGATTTCAGGAGGAGTTGGATGCA
TCTCAGCATGACGGACAGGATCATACCTTGAAGGGAAGTAATCGATCTCC
TCATCCCTGTGCATGAAATTCATGAAACCGTCATAATGATTGTTGTGCTG
AGCACATTTGGGTGCATTTACTGGGAGTTGAAGATAGTTCGGCCCTAGAC
GGTGCCTCTGAGTATCAGCATAGGAGAAGATTCGAGTCTGGAGCAACTTA
TCATTTGAAAT
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