CN189696

Overview
NameCN189696
Unique NameCN189696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ATC1_SCHPO (Calcium-transporting ATPase 1 OS=Schizosaccharomyces pombe GN=pmr1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.771e-54
Identity = 105/242 (43.39%), Postives = 165/242 (68.18%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF---GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR +VR++++     G+RV++ITGD+  TA +I R +G+       E I + ++TG +  D+ +          ++F+R  P+HK +IV  L+  G+VVAMTGDGVNDAPALKLADIG+AMG  GT+VAKEA+DM+L DD+F+TI++AV EG+ I++N+K FI + +S+++  ++ I +++  G    +  +Q+LW+N++ DGPPA +LG    D+D+M KPPR  +  +I+  +L R L
Sbjct:  522 DPPRPQVRESVQYLMTGGVRVIMITGDSVVTAISIARSLGMAIPSNDEEAIRNYALTGAQLDDLDSSSLRDAVSRVVVFARTTPQHKMKIVEALQSLGDVVAMTGDGVNDAPALKLADIGIAMGRQGTDVAKEAADMILTDDSFATILSAVEEGKGIFNNIKNFITFQLSTSVAALSLIAISSVFGFQNPLNAMQILWINILMDGPPAQSLGVESVDEDVMMKPPRPRNAPIISVQLLQRVL 763          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: CTPF_MYCTU (Probable cation-transporting ATPase F OS=Mycobacterium tuberculosis GN=ctpF PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.813e-52
Identity = 106/239 (44.35%), Postives = 146/239 (61.09%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR     A+  C +AGI V +ITGD+  TA AI  E+G+    E  +   +TG E   +   +     D   +F+R  P  K  +V+ L+  G VVAMTGDGVNDAPAL+ A+IGVAMG  GTEVAK+A+DMVL DD+F+TI AAV EGR ++DN+  FI + + +N+GE   I    A+G+   ++P Q+LW+N+ T       L F P +  IM +PPR  D  L+T W++ R L
Sbjct:  541 DPPRAAAASAVAACHSAGIAVKMITGDHAGTATAIATEVGLLDNTEPAAGSVLTGAELAALSADQYPEAVDTASVFARVSPEQKLRLVQALQARGHVVAMTGDGVNDAPALRQANIGVAMGRGGTEVAKDAADMVLTDDDFATIEAAVEEGRGVFDNLTKFITWTLPTNLGEGLVILAAIAVGVALPILPTQILWINMTTAIALGLMLAFEPKEAGIMTRPPRDPDQPLLTGWLVRRTL 779          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: CTPF_MYCBO (Probable cation-transporting ATPase F OS=Mycobacterium bovis GN=ctpF PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.813e-52
Identity = 106/239 (44.35%), Postives = 146/239 (61.09%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR     A+  C +AGI V +ITGD+  TA AI  E+G+    E  +   +TG E   +   +     D   +F+R  P  K  +V+ L+  G VVAMTGDGVNDAPAL+ A+IGVAMG  GTEVAK+A+DMVL DD+F+TI AAV EGR ++DN+  FI + + +N+GE   I    A+G+   ++P Q+LW+N+ T       L F P +  IM +PPR  D  L+T W++ R L
Sbjct:  541 DPPRAAAASAVAACHSAGIAVKMITGDHAGTATAIATEVGLLDNTEPAAGSVLTGAELAALSADQYPEAVDTASVFARVSPEQKLRLVQALQARGHVVAMTGDGVNDAPALRQANIGVAMGRGGTEVAKDAADMVLTDDDFATIEAAVEEGRGVFDNLTKFITWTLPTNLGEGLVILAAIAVGVALPILPTQILWINMTTAIALGLMLAFEPKEAGIMTRPPRDPDQPLLTGWLVRRTL 779          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ATC1_YARLI (Calcium-transporting ATPase 1 OS=Yarrowia lipolytica GN=PMR1 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.321e-51
Identity = 99/232 (42.67%), Postives = 155/232 (66.81%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITP 715
            DPPR +V +AI      G+RV++ITGD+  TA +I R IG+       +   + G +   + +Q          +F+R  P  K +IV+  +  G+VVAMTGDGVNDAPALKLADIG+AMG  GT+VAKEA+DM+L DD+F+TI++A+ EG+ I++N++ FI + +S+++  ++ + +   +G+   + P+Q+LW+N++ DGPPA +LG  P D D+M KPPR  ++ ++TP
Sbjct:  560 DPPRPDVPRAIRRLTTGGVRVVMITGDSAATALSIGRRIGM--PLMPGTQSVVEGSKLATMSDQALDECLQTASIFARTSPEDKMKIVKGFQRRGDVVAMTGDGVNDAPALKLADIGIAMGQGGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIRNFITFQLSTSMAALSIVAVATIMGLENPLNPMQILWINILMDGPPAQSLGVEPVDPDVMNKPPRPRNEKVMTP 789          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT2C2_RAT (Calcium-transporting ATPase type 2C member 2 OS=Rattus norvegicus GN=Atp2c2 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 99/239 (41.42%), Postives = 157/239 (65.69%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR  V++A++    + + V ++TGD   TA AI R IG+     D   ++++G+E   +       R     +F R  P+HK +I++ L+E G +VAMTGDGVND+ ALK ADIG+AMG  GT+V+KEA+DM+L DD+FS I++AV EG+ I+ N+K F+R+ +S++I  ++ I L+    +P  +  +Q+LWVN++ DGPPA +LG  P D+D +K+PPR   D+++   ++ + L
Sbjct:  574 DPPRAGVKEAVQALSESDVSVKMVTGDALETALAIGRTIGLC----DEKLKAMSGEEVEGMEQDALAARVRQVSVFFRTSPKHKVKIIKALQESGAIVAMTGDGVNDSVALKSADIGIAMGQTGTDVSKEAADMILVDDDFSAIMSAVEEGKGIFYNIKNFVRFQLSTSIAALSLITLSTVCNLPNPLNAMQILWVNIIMDGPPAQSLGVEPVDRDALKRPPRSVKDTILNRALILKIL 808          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT2C2_HUMAN (Calcium-transporting ATPase type 2C member 2 OS=Homo sapiens GN=ATP2C2 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 100/239 (41.84%), Postives = 157/239 (65.69%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR  V++A++    +G+ V +ITGD   TA AI R IG+         Q+++G+E   +   +   R     +F R  P+HK +I++ L+E G +VAMTGDGVNDA ALK ADIG+AMG  GT+V+KEA++M+L DD+FS I+ AV EG+ I+ N+K F+R+ +S++I  ++ I L+    +P  +  +Q+LW+N++ DGPPA +LG  P DKD  ++PPR   D++++  ++ + L
Sbjct:  576 DPPRVGVKEAVQVLSESGVSVKMITGDALETALAIGRNIGLCNG----KLQAMSGEEVDSVEKGELADRVGKVSVFFRTSPKHKLKIIKALQESGAIVAMTGDGVNDAVALKSADIGIAMGQTGTDVSKEAANMILVDDDFSAIMNAVEEGKGIFYNIKNFVRFQLSTSISALSLITLSTVFNLPSPLNAMQILWINIIMDGPPAQSLGVEPVDKDAFRQPPRSVRDTILSRALILKIL 810          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT2C2_MOUSE (Calcium-transporting ATPase type 2C member 2 OS=Mus musculus GN=Atp2c2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.883e-50
Identity = 100/239 (41.84%), Postives = 157/239 (65.69%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR  V++A++    +G+ V ++TGD   TA AI R IG+   +E + + S  G+E           R     +F R  P+HK +I++ L+E G +VAMTGDGVND+ ALK ADIG+AMG  GT+V+KEA++M+L DD+FS I++AV EG+ I+ N+K F+R+ +S++I  ++ I L+    +P  +  +Q+LWVN++ DGPPA +LG  P D+D +++PPR   D+++   ++ R L
Sbjct:  574 DPPRAGVKEAVQVLSESGVSVKMVTGDALETALAIGRTIGL--CNEKLKAMS--GEEVEGTEQGALAARVRQVSVFFRTSPKHKVKIIKALQESGAIVAMTGDGVNDSVALKSADIGIAMGQTGTDVSKEAANMILVDDDFSAIMSAVEEGKGIFYNIKNFVRFQLSTSIAALSLITLSTVCNLPSPLNAMQILWVNIIMDGPPAQSLGVEPVDRDALRRPPRSVGDTILNRALILRVL 808          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ACA8_ARATH (Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.038e-46
Identity = 104/240 (43.33%), Postives = 149/240 (62.08%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQS-ITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIP---VQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLIT 712
            IV  KDP R  V+ ++  C+ AG++V ++TGDN  TA AI  E G+  +  D+S  + I GK F ++ + +     D   +  R+ P  K  +V+ L+  G VVA+TGDG NDAPAL  ADIG+AMGIAGTEVAKE+SD+++ DDNF+++V  V  GRS+Y N++ FI++ ++ N   VA++ +     I  G +P   VQLLWVNL+ D   A AL   PP   +M +PP    + LIT
Sbjct:  677 IVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVN---VAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLIT 913          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ATA1_SYNY3 (Cation-transporting ATPase pma1 OS=Synechocystis sp. (strain PCC 6803) GN=pma1 PE=3 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46
Identity = 97/239 (40.59%), Postives = 148/239 (61.92%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYL 736
            DPPR E   A+  C  AGI V +ITGD+ +TA+AI + +G+    + I+ +   G++   +   +     +   +F+R  P  K ++V  L+E G +VAMTGDGVNDAPALK ADIG+AMG  GTEVA+E+SDM+L DDNF++I AAV EGR++Y N++  I +++  N GE  +I ++  L +   ++ +Q+LW+N++        L F      IM++ PR  ++ LIT  +L R L
Sbjct:  544 DPPRPEAIAAVHACHDAGIEVKMITGDHISTAQAIAKRMGIAAEGDGIAFE---GRQLATMGPAELAQAAEDSCVFARVAPAQKLQLVEALQEKGHIVAMTGDGVNDAPALKRADIGIAMGKGGTEVARESSDMLLTDDNFASIEAAVEEGRTVYQNLRKAIAFLLPVNGGESMTILISVLLALNLPILSLQVLWLNMINSITMTVPLAFEAKSPGIMQQAPRNPNEPLITKKLLHRIL 779          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ACA13_ARATH (Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46
Identity = 99/237 (41.77%), Postives = 151/237 (63.71%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSIT-GKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLIT 712
            I+  KDP R  V++A+EDC+ AG+ + +ITGDN  TA AI  E G+    ++++S+++  G++F +   ++   + +   + +R+ P  K  +V+ LKE G VVA+TGDG NDAPALK ADIG++MGI GTEVAKE+SD+V+ DDNF+++   +  GR +Y+N++ FI++ ++ N+  +   F+ A       +  VQLLWVNL+ D   A AL    P  D+MKK P      LIT
Sbjct:  639 IIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLIT 875          
The following BLAST results are available for this feature:
BLAST of CN189696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
ATC1_SCHPO8.771e-5443.39Calcium-transporting ATPase 1 OS=Schizosaccharomyc... [more]
CTPF_MYCTU4.813e-5244.35Probable cation-transporting ATPase F OS=Mycobacte... [more]
CTPF_MYCBO4.813e-5244.35Probable cation-transporting ATPase F OS=Mycobacte... [more]
ATC1_YARLI5.321e-5142.67Calcium-transporting ATPase 1 OS=Yarrowia lipolyti... [more]
AT2C2_RAT1.548e-5041.42Calcium-transporting ATPase type 2C member 2 OS=Ra... [more]
AT2C2_HUMAN1.548e-5041.84Calcium-transporting ATPase type 2C member 2 OS=Ho... [more]
AT2C2_MOUSE5.883e-5041.84Calcium-transporting ATPase type 2C member 2 OS=Mu... [more]
ACA8_ARATH1.038e-4643.33Calcium-transporting ATPase 8, plasma membrane-typ... [more]
ATA1_SYNY33.021e-4640.59Cation-transporting ATPase pma1 OS=Synechocystis s... [more]
ACA13_ARATH3.021e-4641.77Putative calcium-transporting ATPase 13, plasma me... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189696 ID=CN189696; Name=CN189696; organism=Citrus sinensis; type=EST; length=736bp
GAGGATTGTGGTCACTAAGGATCCTCCTCGTGAAGAAGTTCGTCAAGCAA
TTGAGGATTGCAAAGCCGCTGGAATACGTGTCATGGTCATTACAGGGGAC
AACAAAAATACAGCTGAAGCTATCTGCCGAGAAATTGGTGTATTTGGAGC
TCATGAAGATATCAGTTCACAAAGTATAACTGGAAAAGAATTTATGGATA
TCCACAATCAGAAAAACTATTTAAGACAAGATGGTGGGCTTCTGTTCTCC
AGGGCTGAACCAAGGCATAAACAAGAAATAGTGAGGTTGCTCAAAGAGGA
TGGTGAAGTTGTTGCAATGACTGGAGATGGAGTGAACGATGCACCTGCAT
TGAAATTGGCTGATATAGGGGTAGCAATGGGCATTGCAGGGACAGAGGTT
GCCAAGGAAGCCTCTGATATGGTATTAGCTGATGATAATTTTAGCACAAT
AGTTGCCGCTGTTGGTGAAGGCAGATCCATCTACGACAACATGAAGGCTT
TTATTAGGTATATGATCTCCTCAAATATTGGCGAGGTTGCGTCTATATTC
TTGACAGCTGCTTTGGGTATTCCAGAAGGCATGATACCCGTTCAGCTTCT
CTGGGTAAATCTTGTTACCGATGGGCCCCCTGCAACAGCCTTAGGATTTA
ACCCTCCAGACAAGGATATAATGAAGAAGCCCCCTCGAAGAAGCGATGAC
TCATTGATCACTCCTTGGATTTTATTCCGCTATCTG
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