CN189696

Overview
NameCN189696
Unique NameCN189696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT1A2_BOVIN (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Bos taurus GN=ATP1A2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44
Identity = 98/245 (40.00%), Postives = 150/245 (61.22%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 688
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+        EDI+++                 + G +  D+ +++    L+    ++F+R  P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DDNF++IV  V EGR I+DN+K  I Y ++SNI E+    L     IP  +  V +L ++L TD  PA +L +   + DIMK+ PR
Sbjct:  590 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPREAKACVVHGSDLKDMTSEQLDEILKNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPR 834          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT1A1_HORSE (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Equus caballus GN=ATP1A1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44
Identity = 99/245 (40.41%), Postives = 150/245 (61.22%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 688
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+        EDI+++                 + G +  D+  ++  + LR    ++F+R  P+ K  IV   +  G +VA+TGDGVND+PALK ADIGVAMGIAG++V+K+A+DM+L DDNF++IV  V EGR I+DN+K  I Y ++SNI E+    +     IP  +  V +L ++L TD  PA +L +   + DIMK+ PR
Sbjct:  591 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTPEQLDDILRHHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPR 835          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT12A_MOUSE (Potassium-transporting ATPase alpha chain 2 OS=Mus musculus GN=Atp12a PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44
Identity = 102/263 (38.78%), Postives = 156/263 (59.32%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR-RSDDSLITPWI-LFRYL 736
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+  A+    EDI+ +                 +TG E  D+  ++    L     ++F+R  P+ K  IV   +    VVA+TGDGVND+PALK ADIG+AMGIAG++ AK A+DMVL DDNF++IV  V EGR I+DN+K  I Y ++ NI E+    +    G+P  +  + +L+++L TD  P+ AL +   + DIM + PR +  D L+   + ++ YL
Sbjct:  604 DPPRSTVPDAVSKCRSAGIKVIMVTGDHPITAKAIAKSVGIISANNETVEDIAKRRNIAVEQVNKREAKAAVVTGMELKDMTPEQLDELLINYQEIVFARTSPQQKLIIVEGCQRQDAVVAVTGDGVNDSPALKKADIGIAMGIAGSDAAKNAADMVLLDDNFASIVTGVEEGRLIFDNLKKTIAYTLTKNIAELCPFLIYIVAGLPLPIGTITILFIDLGTDIIPSIALAYEKAESDIMNRKPRHKKKDRLVNKQLAIYSYL 866          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT12A_CAVPO (Potassium-transporting ATPase alpha chain 2 OS=Cavia porcellus GN=ATP12A PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44
Identity = 102/263 (38.78%), Postives = 157/263 (59.70%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR-RSDDSLITPWI-LFRYL 736
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+  A+    EDI+ +                 +TG E  D+  ++    L     ++F+R  P+ K  IV   +    VVA+TGDGVND+PALK ADIG+AMGIAG++ AK A+DMVL DDNF++IV  V EGR I+DN+K  I Y ++ NI E+    +   +G+P  +  + +L+++L TD  P+ AL +   + DIM + PR +  D L+   + ++ YL
Sbjct:  602 DPPRSTVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISANSETVEDIAKRCNIAVEQVNKQDARAAVVTGMELKDMTPEQLDEILANYPEIVFARTSPQQKLIIVEGCQRQNAVVAVTGDGVNDSPALKKADIGIAMGIAGSDAAKNAADMVLLDDNFASIVTGVEEGRLIFDNLKKTIAYTLTKNIAELCPFLVYIIVGLPLPIGTITILFIDLGTDIIPSIALAYEKVESDIMNRKPRHKKKDRLVNHQLAIYSYL 864          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ACA2_ORYSJ (Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44
Identity = 103/237 (43.46%), Postives = 146/237 (61.60%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLIT 712
            IV  KDP R  VRQ++  C++AGI V +ITGDN +TA+AI RE G+          +I G EF +   ++ +       + +R+ P  K  +V+ L+    EVVA+TGDG NDAPAL+ ADIG+AMGIAGTEVAKE++D+V+ DDNFSTIV     GRS+Y N++ F+++ ++ N+  +   F +A       +  VQLLWVN++ D   A AL   PP+ ++MKK P       IT
Sbjct:  658 IVGIKDPVRPGVRQSVATCRSAGISVRMITGDNIDTAKAIARECGILTK----DGIAIEGAEFREKSAEELHDLIPKMQVLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKESADVVILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTSACFTGDAPLTAVQLLWVNMIMDTLGALALATEPPNNNLMKKAPVGRKGKFIT 890          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: ACA12_ARATH (Putative calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44
Identity = 96/237 (40.51%), Postives = 147/237 (62.03%), Query Frame = 2
Query:    5 IVVTKDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHE-DISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLIT 712
            IV  KDP R  V +A+E CK AG+ + +ITGDN  TA+AI  E G+   ++ D     + G +F +  +++   + D   + +R+ P  K  +V+ L+  G VVA+TGDG NDAPALK ADIG++MGI GTEVAKE+SD+V+ DDNF+++   +  GR +Y+N++ FI++ ++ N+  +   F+ A       +  VQLLWVNL+ D   A AL    P  +++K+ P    ++LIT
Sbjct:  643 IVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALIT 879          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT1A1_RABIT (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Oryctolagus cuniculus GN=ATP1A1 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44
Identity = 98/245 (40.00%), Postives = 151/245 (61.63%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 688
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+        EDI+++                 + G +  D+ +++  + L+    ++F+R  P+ K  IV   +  G +VA+TGDGVND+PALK ADIGVAMGIAG++V+K+A+DM+L DDNF++IV  V EGR I+DN+K  I Y ++SNI E+    +     IP  +  V +L ++L TD  PA +L +   + DIMK+ PR
Sbjct:  593 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPR 837          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT1A1_PONAB (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Pongo abelii GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44
Identity = 98/245 (40.00%), Postives = 151/245 (61.63%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 688
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+        EDI+++                 + G +  D+ +++  + L+    ++F+R  P+ K  IV   +  G +VA+TGDGVND+PALK ADIGVAMGIAG++V+K+A+DM+L DDNF++IV  V EGR I+DN+K  I Y ++SNI E+    +     IP  +  V +L ++L TD  PA +L +   + DIMK+ PR
Sbjct:  593 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPR 837          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT1A1_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Homo sapiens GN=ATP1A1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44
Identity = 98/245 (40.00%), Postives = 151/245 (61.63%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 688
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+        EDI+++                 + G +  D+ +++  + L+    ++F+R  P+ K  IV   +  G +VA+TGDGVND+PALK ADIGVAMGIAG++V+K+A+DM+L DDNF++IV  V EGR I+DN+K  I Y ++SNI E+    +     IP  +  V +L ++L TD  PA +L +   + DIMK+ PR
Sbjct:  593 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPR 837          
BLAST of CN189696 vs. ExPASy Swiss-Prot
Match: AT1A3_RAT (Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus GN=Atp1a3 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.300e-44
Identity = 99/245 (40.41%), Postives = 149/245 (60.82%), Query Frame = 2
Query:   20 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH----EDISSQS----------------ITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 688
            DPPR  V  A+  C++AGI+V+++TGD+  TA+AI + +G+        EDI+++                 I G +  D  +++    L+    ++F+R  P+ K  IV   +  G +VA+TGDGVND+PALK ADIGVAMGIAG++V+K+A+DM+L DDNF++IV  V EGR I+DN+K  I Y ++SNI E+    L     IP  +  + +L ++L TD  PA +L +   + DIMK+ PR
Sbjct:  583 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDFTSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPR 827          
The following BLAST results are available for this feature:
BLAST of CN189696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
AT1A2_BOVIN3.693e-4440.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_HORSE3.693e-4440.41Sodium/potassium-transporting ATPase subunit alpha... [more]
AT12A_MOUSE3.693e-4438.78Potassium-transporting ATPase alpha chain 2 OS=Mus... [more]
AT12A_CAVPO3.693e-4438.78Potassium-transporting ATPase alpha chain 2 OS=Cav... [more]
ACA2_ORYSJ3.693e-4443.46Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ACA12_ARATH3.693e-4440.51Putative calcium-transporting ATPase 12, plasma me... [more]
AT1A1_RABIT4.824e-4440.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_PONAB4.824e-4440.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_HUMAN4.824e-4440.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A3_RAT6.300e-4440.41Sodium/potassium-transporting ATPase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189696 ID=CN189696; Name=CN189696; organism=Citrus sinensis; type=EST; length=736bp
GAGGATTGTGGTCACTAAGGATCCTCCTCGTGAAGAAGTTCGTCAAGCAA
TTGAGGATTGCAAAGCCGCTGGAATACGTGTCATGGTCATTACAGGGGAC
AACAAAAATACAGCTGAAGCTATCTGCCGAGAAATTGGTGTATTTGGAGC
TCATGAAGATATCAGTTCACAAAGTATAACTGGAAAAGAATTTATGGATA
TCCACAATCAGAAAAACTATTTAAGACAAGATGGTGGGCTTCTGTTCTCC
AGGGCTGAACCAAGGCATAAACAAGAAATAGTGAGGTTGCTCAAAGAGGA
TGGTGAAGTTGTTGCAATGACTGGAGATGGAGTGAACGATGCACCTGCAT
TGAAATTGGCTGATATAGGGGTAGCAATGGGCATTGCAGGGACAGAGGTT
GCCAAGGAAGCCTCTGATATGGTATTAGCTGATGATAATTTTAGCACAAT
AGTTGCCGCTGTTGGTGAAGGCAGATCCATCTACGACAACATGAAGGCTT
TTATTAGGTATATGATCTCCTCAAATATTGGCGAGGTTGCGTCTATATTC
TTGACAGCTGCTTTGGGTATTCCAGAAGGCATGATACCCGTTCAGCTTCT
CTGGGTAAATCTTGTTACCGATGGGCCCCCTGCAACAGCCTTAGGATTTA
ACCCTCCAGACAAGGATATAATGAAGAAGCCCCCTCGAAGAAGCGATGAC
TCATTGATCACTCCTTGGATTTTATTCCGCTATCTG
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