CN189686

Overview
NameCN189686
Unique NameCN189686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.409e-25
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V  P
Sbjct:  237 GDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFP 329          

HSP 2 Score: 35.8094 bits (81), Expect = 7.409e-25
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 1
Query:  274 DFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 423
            +FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  327 NFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 9.642e-25
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F +  P
Sbjct:  237 GDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFP 329          

HSP 2 Score: 35.8094 bits (81), Expect = 9.642e-25
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 1
Query:  274 DFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 423
            +FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  327 NFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.632e-24
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V  P
Sbjct:  246 GDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          

HSP 2 Score: 25.0238 bits (53), Expect = 1.632e-24
Identity = 15/43 (34.88%), Postives = 24/43 (55.81%), Query Frame = 1
Query:  277 FPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 384
            FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  337 FPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDST 379          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.764e-24
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V  P
Sbjct:  246 GDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          

HSP 2 Score: 24.2534 bits (51), Expect = 2.764e-24
Identity = 15/43 (34.88%), Postives = 23/43 (53.49%), Query Frame = 1
Query:  277 FPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 384
            FPE+  ++PD+   LE +LP R  V        ++EL E + T
Sbjct:  337 FPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDST 379          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.925e-24
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V  P
Sbjct:  246 GDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          

HSP 2 Score: 25.0238 bits (53), Expect = 7.925e-24
Identity = 15/43 (34.88%), Postives = 24/43 (55.81%), Query Frame = 1
Query:  277 FPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 384
            FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  337 FPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.957e-23
Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GDIV  +Q+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V  P
Sbjct:  246 GDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338          

HSP 2 Score: 25.0238 bits (53), Expect = 2.957e-23
Identity = 15/43 (34.88%), Postives = 24/43 (55.81%), Query Frame = 1
Query:  277 FPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 384
            FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  337 FPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.533e-21
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GD++ VL QK+H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    K I +EGMP+Y+ P  +G + I F V  P
Sbjct:  238 GDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFP 330          

HSP 2 Score: 31.9574 bits (71), Expect = 1.533e-21
Identity = 19/56 (33.93%), Postives = 33/56 (58.93%), Query Frame = 1
Query:  259 FISLFDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 426
            F+ +F   + LS ++   LE +LPPR  V++TD ++D+ E   L + N  E+  R+
Sbjct:  325 FLVVFPEKQWLSQEKLPQLEALLPPRQKVRITD-DMDQVE---LKEFNPNEQSWRQ 376          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.712e-21
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GD++ VL QK+H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    + + DEGMP+Y+ P  +G L I F V  P
Sbjct:  238 GDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFP 330          

HSP 2 Score: 30.0314 bits (66), Expect = 5.712e-21
Identity = 15/40 (37.50%), Postives = 25/40 (62.50%), Query Frame = 1
Query:  259 FISLFDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECE 378
            F+ +F     LS ++   LE +LPPR  V++TD ++D+ E
Sbjct:  325 FLVIFPEKHWLSLEKLPQLEALLPPRQKVRITD-DMDQVE 363          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.474e-19
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 3
Query:    3 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            GD++FV+ QKEHP+FKR GD LF E  + L  AL G Q V+ HLD R L I   PGE ++P++ K +  +GM + QR    G LYI F V  P
Sbjct:  239 GDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM-LSQRHHQPGNLYIRFHVDFP 330          

HSP 2 Score: 25.7942 bits (55), Expect = 6.474e-19
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 1
Query:  274 DFPES--LSPDQCKMLETVLPPR 336
            DFPE    +P+Q  +LE  LPPR
Sbjct:  328 DFPEPNFATPEQLALLEKALPPR 350          
BLAST of CN189686 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 3
Query:    6 DIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTV*LP 281
            DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V  P
Sbjct:  230 DIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFP 319          
The following BLAST results are available for this feature:
BLAST of CN189686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
DNJA1_BOVIN7.409e-2549.46DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE9.642e-2548.39DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA2_HUMAN1.632e-2451.61DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN2.764e-2451.61DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_MOUSE7.925e-2450.54DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_RAT2.957e-2349.46DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA4_MOUSE1.533e-2146.24DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA4_HUMAN5.712e-2146.24DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
MAS5_SCHPO6.474e-1948.39Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNJB4_PONAB4.292e-1241.30DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E05_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189686 ID=CN189686; Name=CN189686; organism=Citrus sinensis; type=EST; length=686bp
ACGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAG
CGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGC
TCTCTGTGGCTTTCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCC
TCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCC
ATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAA
ACTGTACATTCATTTCACTGTTTGACTTCCCTGAGTCACTGAGCCCAGAC
CAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCT
CACCGATATGGAACTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGA
ACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATAC
GATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCA
GCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTTAGTATTTTCATTG
TTTGGGAGAAAAAGATTCTCAACATATTTATTTTCTGTTATAGGCTTTAG
AGGTTCTAGTTTTGGTTTGTCTGTCCTTATTCTTATGTTTTTCTGATAAC
TGACTATGTAATGGAATTCTAGCGTTGCACCTTCAA
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