CN189684

Overview
NameCN189684
Unique NameCN189684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_PLAFA (V-type proton ATPase subunit B OS=Plasmodium falciparum GN=VAPB PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.132e-111
Identity = 201/248 (81.05%), Postives = 219/248 (88.31%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            +EMIQTGISTIDVMNSI RGQKIPLFSAAGLPHNEI AQICRQA LV+  +  D+      +DNFA+VF AMGVNMETA++F++DFEENG MERV LFLNLANDPTIERI+TPRIALTTAEYLA+E   HV VILTDMSSYADALREVS+AREEVPGRRGYPGYMY+DL+ IYERAGR+EGR GSITQ PILTMPNDDITHP PDLTGYITEGQI++DR L NRQIYPPINVLPSLSRLMKS IG  M
Sbjct:  152 KEMIQTGISTIDVMNSIVRGQKIPLFSAAGLPHNEIGAQICRQASLVQGKDVLDH-----SDDNFAVVFGAMGVNMETARYFRQDFEENGKMERVCLFLNLANDPTIERILTPRIALTTAEYLAFEKEMHVFVILTDMSSYADALREVSSAREEVPGRRGYPGYMYSDLSTIYERAGRVEGRNGSITQFPILTMPNDDITHPIPDLTGYITEGQIFVDRNLYNRQIYPPINVLPSLSRLMKSGIGHNM 394          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_PYRHO (V-type ATP synthase beta chain OS=Pyrococcus horikoshii GN=atpB PE=3 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 2.798e-95
Identity = 171/246 (69.51%), Postives = 203/246 (82.52%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++            GEE++FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++   HVLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGRI GRKGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L  + IYPPI+VLPSLSRLMK  IG+G
Sbjct:  129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------------GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_PYRFU (V-type ATP synthase beta chain OS=Pyrococcus furiosus GN=atpB PE=3 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 8.141e-95
Identity = 170/246 (69.11%), Postives = 202/246 (82.11%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++            GEE++FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++   HVLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R L  R IYPPI+VLPSLSRLMK  IG+G
Sbjct:  126 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNKLAAQIARQAKVL------------GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRDLHRRGIYPPIDVLPSLSRLMKDGIGKG 359          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_PYRAB (V-type ATP synthase beta chain OS=Pyrococcus abyssi GN=atpB PE=3 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 5.277e-94
Identity = 169/246 (68.70%), Postives = 202/246 (82.11%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++            GEE++FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++    VLVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGRI G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L  + IYPPI+VLPSLSRLMK  IG+G
Sbjct:  129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------------GEEESFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_THESI (V-type ATP synthase beta chain OS=Thermococcus sp. (strain KI) GN=atpB PE=3 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 9.000e-94
Identity = 169/246 (68.70%), Postives = 201/246 (81.71%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++            GEE+ FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++    VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L  + IYPPI+VLPSLSRLMK  IG+G
Sbjct:  127 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 360          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_THEGJ (V-type ATP synthase beta chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpB PE=3 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 9.000e-94
Identity = 169/246 (68.70%), Postives = 201/246 (81.71%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++            GEE+ FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++    VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L  + IYPPI+VLPSLSRLMK  IG+G
Sbjct:  127 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 360          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_PYRKO (V-type ATP synthase beta chain OS=Pyrococcus kodakaraensis GN=atpB PE=3 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 9.000e-94
Identity = 169/246 (68.70%), Postives = 201/246 (81.71%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++            GEE+ FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++    VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L  + IYPPI+VLPSLSRLMK  IG+G
Sbjct:  129 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 362          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_THEON (V-type ATP synthase beta chain OS=Thermococcus onnurineus (strain NA1) GN=atpB PE=3 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.535e-93
Identity = 168/246 (68.29%), Postives = 201/246 (81.71%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTG+S ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++            GEE+ FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++    VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGR+ G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L  + IYPPI+VLPSLSRLMK  IG+G
Sbjct:  129 DFIQTGVSAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELYRKGIYPPIDVLPSLSRLMKDGIGKG 362          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_DESSY (V-type ATP synthase beta chain OS=Desulfurococcus sp. (strain SY) GN=atpB PE=3 SV=2)

HSP 1 Score: 341.658 bits (875), Expect = 2.619e-93
Identity = 168/246 (68.29%), Postives = 200/246 (81.30%), Query Frame = 1
Query:   10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747
            + IQTGIS ID MN++ RGQK+P+FS +GLPHN +AAQI RQA ++            GEE+ FA+VFAAMG+  E A FFK+ FEE G++ER  LFLNLA+DP IERIITPR+ALT AEYLA++    VLVILTDM++YA+ALRE+SAAREEVPGRRGYPGYMYTDLA IYER GR+ G+KGSITQ+PILTMP+DDITHP PDLTGYITEGQI + R+L  + IYPPI+VLPSLSRLMK  IG+G
Sbjct:  127 DFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVL------------GEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERGGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGKG 360          
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_HALMA (V-type ATP synthase beta chain OS=Haloarcula marismortui GN=atpB PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.467e-93
Identity = 168/251 (66.93%), Postives = 201/251 (80.08%), Query Frame = 1
Query:    7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDN---FAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750
            EE IQTG+S ID MN++ RGQK+P+FSA+GLPHN++A QI RQA + +         EDGE+D    FA++F AMG+  E A  F  DFE  G++ER  +F+NLA+DP +ER ITPR+ALTTAEYLA+E   HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLAQ+YERAGRIEGR+GS+TQ+PILTMP DD THP PDLTGYITEGQIYIDR L ++ I PPINVLPSLSRLM   IGEG+
Sbjct:  123 EEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQATVPEE--------EDGEDDEGSEFAVIFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTITPRLALTTAEYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQLPILTMPGDDDTHPIPDLTGYITEGQIYIDRDLNSQGIQPPINVLPSLSRLMDDGIGEGL 365          
The following BLAST results are available for this feature:
BLAST of CN189684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATB_PLAFA2.132e-11181.05V-type proton ATPase subunit B OS=Plasmodium falci... [more]
VATB_PYRHO2.798e-9569.51V-type ATP synthase beta chain OS=Pyrococcus horik... [more]
VATB_PYRFU8.141e-9569.11V-type ATP synthase beta chain OS=Pyrococcus furio... [more]
VATB_PYRAB5.277e-9468.70V-type ATP synthase beta chain OS=Pyrococcus abyss... [more]
VATB_THESI9.000e-9468.70V-type ATP synthase beta chain OS=Thermococcus sp.... [more]
VATB_THEGJ9.000e-9468.70V-type ATP synthase beta chain OS=Thermococcus gam... [more]
VATB_PYRKO9.000e-9468.70V-type ATP synthase beta chain OS=Pyrococcus kodak... [more]
VATB_THEON1.535e-9368.29V-type ATP synthase beta chain OS=Thermococcus onn... [more]
VATB_DESSY2.619e-9368.29V-type ATP synthase beta chain OS=Desulfurococcus ... [more]
VATB_HALMA4.467e-9366.93V-type ATP synthase beta chain OS=Haloarcula maris... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E04_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189684 ID=CN189684; Name=CN189684; organism=Citrus sinensis; type=EST; length=751bp
GAGGCTGAAGAGATGATACAGACAGGGATTTCTACCATTGATGTGATGAA
CTCCATTGCTAGAGGACAAAAGATCCCTCTTTTTTCTGCTGCCGGTCTTC
CCCATAATGAAATTGCTGCTCAGATTTGTCGCCAGGCTGGTTTAGTCAAG
CGATTGGAGAAGACTGATAATCTTCTTGAGGATGGGGAAGAGGACAACTT
TGCAATTGTGTTTGCAGCTATGGGTGTAAATATGGAGACTGCACAGTTTT
TCAAACGTGATTTTGAGGAAAATGGATCAATGGAGCGAGTGACTCTTTTT
CTGAATCTGGCTAACGACCCTACAATTGAACGTATTATCACTCCTCGTAT
TGCTCTTACTACTGCAGAGTATCTGGCATATGAATGTGGGAAGCATGTTC
TTGTCATACTGACGGACATGAGTTCTTATGCTGATGCTCTTCGTGAGGTG
TCTGCTGCCCGAGAGGAAGTGCCTGGAAGAAGAGGGTATCCTGGGTATAT
GTATACTGATTTGGCTCAAATTTATGAGCGTGCTGGACGAATTGAAGGTC
GAAAAGGTTCCATCACCCAAATTCCAATATTGACTATGCCAAATGACGAT
ATTACACATCCCACTCCAGATCTTACGGGATATATCACCGAGGGGCAGAT
TTACATTGACAGGCAGCTCCAGAACAGACAGATATATCCTCCGATCAATG
TCCTTCCGTCCCTATCTCGTCTGATGAAGAGTGCTATTGGTGAGGGGATG
A
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