CN189684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_METTH (V-type ATP synthase beta chain OS=Methanobacterium thermoautotrophicum GN=atpB PE=3 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 5.834e-93 Identity = 166/246 (67.48%), Postives = 198/246 (80.49%), Query Frame = 1 Query: 10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747 E IQTGISTID MN++ RGQK+P+FS +GLPHNE+AAQI RQA ++ EE FA++FAAMG+ E A +F RDFE G++ERVT+F+NLA+DP IERIITPR+ALTTAEY A+E HVLVILTD+++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA +YERAGRI G++GSITQ+PIL MP DDITHP PDLTGYITEGQI + R L + IYPP++VLPSLSRLM IGEG Sbjct: 131 EFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVL------------AEESEFAVIFAAMGITHEEANYFMRDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDMHVLVILTDLTNYCEALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQMPILVMPQDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPVDVLPSLSRLMSGGIGEG 364
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_NATPD (V-type ATP synthase beta chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpB PE=3 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.217e-92 Identity = 168/247 (68.02%), Postives = 198/247 (80.16%), Query Frame = 1 Query: 7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747 EE IQTG+S ID MN++ RGQK+P+FS +GLPHNE+A QI RQA + + D E G E FA++F AMG+ E A F DFE G++ER +F+NLA+DP +ER +TPR+ALTTAEYLA+E G HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLAQ+YERAGRIEGR+GS+TQIPILTMP DD THP PDLTGYITEGQIYIDR L ++ I PPINVLPSLSRLM IGEG Sbjct: 124 EEFIQTGVSAIDGMNTLIRGQKLPIFSGSGLPHNELALQIARQASVPEEESGDD---EAGSE--FAVIFGAMGITQEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEEGYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIYIDRNLNSQGIEPPINVLPSLSRLMDDGIGEG 365
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_METLZ (V-type ATP synthase beta chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=atpB PE=3 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 3.781e-92 Identity = 167/247 (67.61%), Postives = 194/247 (78.54%), Query Frame = 1 Query: 10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750 + IQTGISTID N++ RGQK+P+FS+AGLPHNEIA QI RQA + G D FA+VFAAMG+ E A +F DFE G++ER +FLNLA+DP +ER +TPR+ALTTAEYLAYE G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G KGS+TQIPILTMP DDITHP PDLTGYITEGQI I +L + IYPPINVLPSLSRLM IG+GM Sbjct: 124 DFIQTGISTIDGTNTLVRGQKLPIFSSAGLPHNEIALQIARQAKV------------PGSSDEFAVVFAAMGITREEANYFMADFERTGALERAVVFLNLADDPAVERTVTPRLALTTAEYLAYELGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASIYERAGIIKGLKGSVTQIPILTMPGDDITHPIPDLTGYITEGQIVISPELHRKGIYPPINVLPSLSRLMNLGIGKGM 358
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_ARCFU (V-type ATP synthase beta chain OS=Archaeoglobus fulgidus GN=atpB PE=3 SV=2) HSP 1 Score: 337.421 bits (864), Expect = 4.939e-92 Identity = 166/246 (67.48%), Postives = 196/246 (79.67%), Query Frame = 1 Query: 10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747 E IQTGIS ID MN++ RGQK+P+FS +GLPHN+IA QI RQA + GE + FA++FAAMG+ E A F ++FE G++ER +FLNLANDP IER++TPR+ALT AE+LAYE H+LVILTDM++Y +ALRE+SAAREEVPGRRGYPGYMYTDLA IYERAGRI GRKG+ITQ+PILTMP DDITHP PDLTGYITEGQI + R+L + IYPPINVLPSLSRLMK IGEG Sbjct: 124 EFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIALQIARQAKV------------RGEGEEFAVIFAAMGITYEEAYQFMKEFERTGALERAVVFLNLANDPAIERLLTPRMALTAAEFLAYEYDLHILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMPILTMPGDDITHPIPDLTGYITEGQIVLSRELHAKGIYPPINVLPSLSRLMKEGIGEG 357
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_METS3 (V-type ATP synthase beta chain OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=atpB PE=3 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 8.424e-92 Identity = 162/245 (66.12%), Postives = 199/245 (81.22%), Query Frame = 1 Query: 7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIG 741 EE IQTGISTID MN++ RGQK+P+FS +GLPHNE+AAQI RQA ++ G++ FA++FAAMG+ E A FF RDFE G++E+VT+F+NLA+DP IERI+TP++ALTTAEY A+ G VLVILTDM++Y +ALRE+SAAR+EVPGRRGYPGYMYTDLA IYERAGRI+G++GSITQ+PIL MP DDITHP PDLTGYITEGQI + R+L + IYPP++VLPSLSRLM IG Sbjct: 130 EEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVL------------GDDAEFAVIFAAMGITHEEANFFMRDFERTGALEKVTVFMNLADDPAIERILTPKMALTTAEYFAFTLGMQVLVILTDMTNYCEALREISAARDEVPGRRGYPGYMYTDLANIYERAGRIDGKEGSITQMPILVMPQDDITHPIPDLTGYITEGQIVLSRELNRKGIYPPVDVLPSLSRLMSGGIG 362
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_HALWD (V-type ATP synthase beta chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpB PE=3 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 1.100e-91 Identity = 162/248 (65.32%), Postives = 198/248 (79.84%), Query Frame = 1 Query: 7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750 EE IQTG++ +D MN++ RGQK+P+FS +GLPHNE+A QI RQA V E D+ +DG E FA++F AMG+ E A F DFE G++ER +F+NLA+DP +ER +TPR+ LTTAEYLA+E HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLA +YERAGRIEGR+GS+TQIPILTMP DD THP PDLTGYITEGQIY+DR L ++ + PP+NVLPSLSRLM IGEG+ Sbjct: 123 EEFIQTGVAAVDGMNTLVRGQKLPIFSGSGLPHNELALQIARQA-TVPEEENADDNEDDGSE--FAVIFGAMGITAEEANEFMEDFERTGALERSVVFMNLADDPAVERTVTPRMVLTTAEYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLATLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIYVDRDLNSQGVQPPVNVLPSLSRLMDDGIGEGL 367
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_HALVO (V-type ATP synthase beta chain OS=Halobacterium volcanii GN=atpB PE=1 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 1.100e-91 Identity = 165/248 (66.53%), Postives = 196/248 (79.03%), Query Frame = 1 Query: 7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGM 750 EE IQTG+S ID MN++ RGQK+P+FSA+GLPHN++A QI RQA + + E GEE FA+VF AMG+ E A F DFE G++ER +F NLA+DP +ER +TPR+ALTTAEYLA++ HVLVILTDM++Y +ALRE+ AAREEVPGRRGYPGYMYTDLAQ+YERAGRI+GR GS+TQIPILTMP DD THP PDLTGYITEGQIYIDR L ++ I PPIN LPSLSRLM IGEG+ Sbjct: 123 EEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQATVPEDEES-------GEESEFAVVFGAMGITQEEANEFMEDFERTGALERSVVFTNLADDPAVERTVTPRLALTTAEYLAFDKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIYIDRDLNSQGIRPPINPLPSLSRLMDDGIGEGL 363
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_METMJ (V-type ATP synthase beta chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpB PE=3 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.877e-91 Identity = 164/247 (66.40%), Postives = 197/247 (79.76%), Query Frame = 1 Query: 7 EEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747 E+ IQTGISTID N++ RGQK+P+FSA+GLPHN++A QI RQA + G + FA+VFAAMG+ E A +F DFE+ G++ER +FLNLA+DP +ER ITPR+ALTTAEYLA++ G HVLVILTDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLA IYERAG I+G KGS+TQIPILTMP DDITHP PDLTGYITEGQI ++R+L + IYPPINVLPSLSRLM IGEG Sbjct: 123 EDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNDVALQIARQAKV------------PGSTEEFAVVFAAMGITREEANYFMADFEKTGALERSVVFLNLADDPAVERTITPRLALTTAEYLAFDLGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASIYERAGIIKGVKGSVTQIPILTMPGDDITHPIPDLTGYITEGQIVVNRELHRKGIYPPINVLPSLSRLMNLGIGEG 357
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB_UNCMA (V-type ATP synthase beta chain OS=Uncultured methanogenic archaeon RC-I GN=atpB PE=3 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 2.451e-91 Identity = 166/249 (66.67%), Postives = 195/249 (78.31%), Query Frame = 1 Query: 1 EAEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747 + ++ IQTGISTID MN++ RGQK+P+FS +GLPHNEIA QI RQA +V G + FA+VF AMG+ E AQ F +DFE G++ER +FLNLA+DP IERIITPR+ALTTAEYLA+E HVLVI TDM++Y +ALR++ AAREEVPGRRGYPGYMYTDLAQ+YERAG IEG+KGSITQ+PILTMP DDITHP PDLTGYITEGQI + R L + IYPPINV PSLSRLM IG G Sbjct: 121 QPKDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNEIALQIARQAKVV------------GSTEPFAVVFCAMGITAEEAQTFMKDFERTGALERAVVFLNLADDPAIERIITPRLALTTAEYLAFEHDMHVLVIYTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGIIEGKKGSITQVPILTMPGDDITHPIPDLTGYITEGQIVVARDLHRKNIYPPINVSPSLSRLMSLGIGAG 357
BLAST of CN189684 vs. ExPASy Swiss-Prot
Match: VATB3_METHJ (V-type ATP synthase beta chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB3 PE=3 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 3.201e-91 Identity = 162/246 (65.85%), Postives = 200/246 (81.30%), Query Frame = 1 Query: 10 EMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEG 747 + IQTGIS+ID MN++ RGQK+P+FS AGLPHN +A+QI RQA + G+ + FA+VFAAMG+ E + FF R+FEE+G++ER LFLNLA+DP IERIITPR+ALTTAEYLA++ G HVLV+LTD+++Y +ALRE++AAREEVPGRRGYPGY+YTDLA +YERAGRI GR+GSITQIPILTMP+DDITHP PDLTGYITEGQI + R L + IYPP++VLP LSRLM+ IG G Sbjct: 130 DSIQTGISSIDGMNTLVRGQKLPIFSGAGLPHNLLASQIARQAKVT------------GQAEKFAVVFAAMGITYEESAFFIREFEESGALERTVLFLNLADDPAIERIITPRLALTTAEYLAFDKGMHVLVVLTDLTNYCEALREIAAAREEVPGRRGYPGYIYTDLASLYERAGRIRGREGSITQIPILTMPDDDITHPVPDLTGYITEGQIVLSRDLHRKGIYPPVDVLPCLSRLMQGGIGPG 363 The following BLAST results are available for this feature:
BLAST of CN189684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189684 ID=CN189684; Name=CN189684; organism=Citrus sinensis; type=EST; length=751bpback to top |