DR908818

Overview
NameDR908818
Unique NameDR908818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.317e-35
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGE 258
            AT++A  +L  THPIRLGLALNFSVFYYEI+NSPERACHLAK+AFDEAI+ELD+LNE+SYKDSTLIMQLLRDNLTLWTSD+ E G+
Sbjct:  156 ATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLEEGGK 241          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.364e-35
Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVG 294
            A   A ADL PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +   D  K     + G
Sbjct:  159 AQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKETSKQQPG 256          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.364e-35
Identity = 73/84 (86.90%), Postives = 77/84 (91.67%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED 252
            A   A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDI ED
Sbjct:  161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISED 244          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.618e-35
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED-GEDAQKAN 276
            A   A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD  +D G+D ++A+
Sbjct:  159 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADDVGDDIKEAS 251          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.618e-35
Identity = 72/90 (80.00%), Postives = 78/90 (86.67%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 270
            A   A  +L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  +
Sbjct:  166 AQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEMR 255          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.256e-34
Identity = 71/90 (78.89%), Postives = 79/90 (87.78%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 270
            A   A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LA +AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  K
Sbjct:  161 AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLANEAFDEAIAELDTLEEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIK 250          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.641e-34
Identity = 70/90 (77.78%), Postives = 79/90 (87.78%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 270
            A   A  +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+++DTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  K
Sbjct:  157 AQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 246          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.798e-34
Identity = 71/96 (73.96%), Postives = 80/96 (83.33%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAK 288
            A+  A  DLPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+  +  D    +G  K
Sbjct:  155 ASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVDPNAGDGEPK 250          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.798e-34
Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED 252
            A   A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTL+EESYKDSTLIMQLL DNLTLWTSDI ED
Sbjct:  161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISED 244          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.655e-34
Identity = 71/96 (73.96%), Postives = 80/96 (83.33%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAK 288
            A   A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ ++  +  K     K
Sbjct:  164 AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIKEAAAPK 259          
The following BLAST results are available for this feature:
BLAST of DR908818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14311_ARATH4.317e-3581.4014-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
1433A_SOYBN7.364e-3576.5314-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14331_MAIZE7.364e-3586.9014-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
14334_SOLLC9.618e-3579.5714-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14331_ORYSJ9.618e-3580.0014-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
1433_OENEH1.256e-3478.8914-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14332_SOLTU1.641e-3477.7814-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
1433E_DROME2.798e-3473.9614-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
14332_MAIZE2.798e-3485.7114-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14334_ARATH3.655e-3473.9614-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16946 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908818 ID=DR908818; Name=DR908818; organism=Citrus sinensis; type=EST; length=575bp
GCTACCACTGCTGCAGAGGCTGATTTGCCACCTACACATCCCATCCGATT
GGGTTTGGCTCTGAATTTCTCTGTCTTTTATTATGAGATCATGAATTCTC
CTGAAAGGGCTTGCCATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCC
GAGCTGGACACCCTCAACGAGGAGTCCTACAAAGACAGCACCTTAATTAT
GCAGCTTCTTAGGGACAACCTTACCTTATGGACTTCTGACATTCCAGAAG
ATGGAGAAGATGCCCAGAAGGCTAATGGCACTGCCAAAGTTGGTGGGGGA
GAAGATGCAGAGTGACAAGGAGAGCATCGAGGAGTTGCTATGTGATTGGG
GGAGAAAGGATGAGACTTGTTAATCAAACTTAGTGTTTGCTTAAAGTGCC
ATTGTCTTTTGCTTGCTGTATTTTCATTTTAATAGTGCCATATTGTGGTA
TGGCTTACTTTATAGCATGGTTGTCCAAACATGATTGGTCGTACTTGTCC
TGCCTCCCATTGTTTCCCTCCTGTCATGATGGATGGAGTGTAGTAGAGGA
TTATTTGGTCTGATTAAAAAAAAAA
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