DR908818

Overview
NameDR908818
Unique NameDR908818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 3.655e-34
Identity = 70/87 (80.46%), Postives = 78/87 (89.66%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGED 261
            A   A ++L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D  D
Sbjct:  163 AQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDVAD 249          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.773e-34
Identity = 68/83 (81.93%), Postives = 77/83 (92.77%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 249
            AT  A+ +LPPTHPIRLGLALNFSVFYYEI+N+P++ACHLAKQAFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS   E
Sbjct:  154 ATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSEAE 236          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.773e-34
Identity = 70/90 (77.78%), Postives = 79/90 (87.78%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 270
            A   A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD+ +D  +  K
Sbjct:  162 AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDTAEEVK 251          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 4.773e-34
Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI-----PEDGEDAQKANG 279
            A+  A  +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+      +DG+D Q   G
Sbjct:  154 ASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDVHNMEKNQDGDDDQNEPG 251          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.773e-34
Identity = 73/94 (77.66%), Postives = 82/94 (87.23%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED--GEDAQKAN 276
            A   A ADL PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLW SDI ++  G++ ++A+
Sbjct:  158 AQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAGGDEIKEAS 251          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.234e-34
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI-PEDGEDAQKA 273
            A   A ADL PTHPIRLGLALNFSVFYYEI+NS +RAC LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD+  E G+D ++A
Sbjct:  160 AQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEA 251          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.234e-34
Identity = 70/90 (77.78%), Postives = 79/90 (87.78%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 270
            A+  A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ ++  D  K
Sbjct:  157 ASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIK 246          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.063e-33
Identity = 75/103 (72.82%), Postives = 84/103 (81.55%), Query Frame = 1
Query:    1 ATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDA 309
            A+  A A+L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD+L+EESYKDSTLIMQLLRDNLTLWTS    D E +  A G    G  E+A
Sbjct:  157 ASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTS----DAEYSAAAAGGNTEGAQENA 255          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433Z_AEDAE (14-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.814e-33
Identity = 66/86 (76.74%), Postives = 78/86 (90.70%), Query Frame = 1
Query:   13 AEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 270
            ++  + PTHPIRLGLALNFSVFYYEI+NSP++AC LAKQAFD+AI+ELDTLNE+SYKDSTLIMQLLRDNLTLWTSD   DG++ Q+
Sbjct:  159 SKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPQE 244          
BLAST of DR908818 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.369e-33
Identity = 66/83 (79.52%), Postives = 77/83 (92.77%), Query Frame = 1
Query:   13 AEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGED 261
            ++A + PTHPIRLGLALNFSVFYYEI+NSP++AC LAKQAFD+AI+ELDTLNE+SYKDSTLIMQLLRDNLTLWTSD   DG++
Sbjct:  158 SKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 240          
The following BLAST results are available for this feature:
BLAST of DR908818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14331_ARATH3.655e-3480.4614-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
1433_TRIHA4.773e-3481.9314-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433_HELAN4.773e-3477.7814-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
1433_DICDI4.773e-3472.4514-3-3-like protein OS=Dictyostelium discoideum GN... [more]
14337_ARATH4.773e-3477.6614-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14335_ARATH6.234e-3480.4314-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
14333_ARATH6.234e-3477.7814-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
RAD24_SCHPO1.063e-3372.82DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433Z_AEDAE1.814e-3376.7414-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta... [more]
1433Z_BOMMO2.369e-3379.5214-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16946 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908818 ID=DR908818; Name=DR908818; organism=Citrus sinensis; type=EST; length=575bp
GCTACCACTGCTGCAGAGGCTGATTTGCCACCTACACATCCCATCCGATT
GGGTTTGGCTCTGAATTTCTCTGTCTTTTATTATGAGATCATGAATTCTC
CTGAAAGGGCTTGCCATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCC
GAGCTGGACACCCTCAACGAGGAGTCCTACAAAGACAGCACCTTAATTAT
GCAGCTTCTTAGGGACAACCTTACCTTATGGACTTCTGACATTCCAGAAG
ATGGAGAAGATGCCCAGAAGGCTAATGGCACTGCCAAAGTTGGTGGGGGA
GAAGATGCAGAGTGACAAGGAGAGCATCGAGGAGTTGCTATGTGATTGGG
GGAGAAAGGATGAGACTTGTTAATCAAACTTAGTGTTTGCTTAAAGTGCC
ATTGTCTTTTGCTTGCTGTATTTTCATTTTAATAGTGCCATATTGTGGTA
TGGCTTACTTTATAGCATGGTTGTCCAAACATGATTGGTCGTACTTGTCC
TGCCTCCCATTGTTTCCCTCCTGTCATGATGGATGGAGTGTAGTAGAGGA
TTATTTGGTCTGATTAAAAAAAAAA
back to top