DR908812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.138e-42 Identity = 88/123 (71.54%), Postives = 96/123 (78.05%), Query Frame = 3 Query: 3 GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 GANPS KVVDIVDTFRLQEQP FDKKQF+ ++KR+IK L KLSEERQ FKKN+EGA K L+SKLSDLQFFVGESMHDDG +VFAYYK+GATDPTFLY AD LKEVKC Sbjct: 46 GANPSAEGGDEEGVKIRLV-KVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 2.792e-42 Identity = 85/123 (69.11%), Postives = 93/123 (75.61%), Query Frame = 3 Query: 3 GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 GANPS KVVDIVDTFRLQEQPAFDKKQF+ Y+KR+IK LT KL E + FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYY+EGA DPTFLY A LKEVKC Sbjct: 46 GANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.792e-42 Identity = 86/103 (83.50%), Postives = 91/103 (88.35%), Query Frame = 3 Query: 63 KVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 KVVDIVDTFRLQEQP FDKKQFVT++KR+IKLLTPKL E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD LVFA YKEGATDP F+Y A LKEVKC Sbjct: 68 KVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_PEA (Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 4.762e-42 Identity = 86/123 (69.92%), Postives = 96/123 (78.05%), Query Frame = 3 Query: 3 GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 GANPS KVVDIVD FRLQEQP FDKKQF+ ++K++IKLLTPKL E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GA DPTFLY + ALKE+KC Sbjct: 46 GANPSAEGGEDEGVDDTAV-KVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGKLKDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFSFALKEIKC 167
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.762e-42 Identity = 84/123 (68.29%), Postives = 93/123 (75.61%), Query Frame = 3 Query: 3 GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 GANPS KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKL+ E+QE FKK IEGATKFLL KL D QFFVGE MHDD +VFAYYKEGAT+PTFLY A LKEVKC Sbjct: 46 GANPSAEEGGEDEGVDDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 8.123e-42 Identity = 84/123 (68.29%), Postives = 95/123 (77.24%), Query Frame = 3 Query: 3 GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 GANPS KVVDIVDTFRLQEQPAFDKKQF+++MKR+IK L+ KL + ++FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYYKEGA DPTFLY A LKEVKC Sbjct: 46 GANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.194e-38 Identity = 80/123 (65.04%), Postives = 90/123 (73.17%), Query Frame = 3 Query: 3 GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 GANPS KVVDIVDTFRLQEQP+ DKK F++ +K++IK LTP L E+QE FK IEGA K+LL K+ DLQFFVGESM DD +VFAYYKEGATDPTFLYIA LKEVKC Sbjct: 46 GANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.661e-36 Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 3 Query: 3 GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 371 GANPS KVVDIVDTFRLQEQP FDKK FV+Y+K++IK LT L E+ + FKK +EGATKFLLSKL DLQFFVGESM DD + FAYYK+GAT+ TFLY + LKE+KC Sbjct: 46 GANPSAEGGEDESVDDTAV-KVVDIVDTFRLQEQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP1_DICDI (Translationally-controlled tumor protein homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282853 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 63 KVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 368 +V+++VD RL E +FDKK + Y+K ++K + KL++ R + FKK+ K +L K + +F+ GE+M DG + YYK G DP FLY D L+ VK Sbjct: 70 QVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKDAADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIFLYFKDGLESVK 173
BLAST of DR908812 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13 Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 63 KVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 368 +V ++V +FRLQ +FDKK ++TY+K ++K + KL E +R F+K + K +++ D +F++GESM+ DG + Y+E P F D LKE+K Sbjct: 63 QVNNVVHSFRLQST-SFDKKSYLTYLKGYMKAIKSKLQESNPDRVAAFEKGAQDFAKKIVANFKDYEFYIGESMNPDGMVCLLNYREDGVTPYFTMWKDGLKEIK 166 The following BLAST results are available for this feature:
BLAST of DR908812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908812 ID=DR908812; Name=DR908812; organism=Citrus sinensis; type=EST; length=576bpback to top |