CN189638

Overview
NameCN189638
Unique NameCN189638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16
Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 3
Query:  156 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            +AG+AEFI+TF+F++    + +   K  ++   +  G+   + A    +FV V   A ISGGH+NPAV  G F+   ++L R + Y++ Q LG+I C A +V               ++V A G ++G G+G     EI+ TF LVYTV+ +A D K+     ++ I+AP+ IGF V    L            A S G A++
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV 207          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16
Identity = 67/203 (33.00%), Postives = 98/203 (48.28%), Query Frame = 3
Query:  156 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG------AEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            RA I+EFIAT +F++ +  +V+ + K     ST G +  +A A    + V V     ISGGH+NPAVT G  +  ++SL RA+ Y V Q LGA+    ++          RLA G  +   G+    G+G       E + TF L+Y  ++   D KR     HV  +APL +GF +    LA           AR  G A++
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLL----------RLATG-GMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV 213          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16
Identity = 66/197 (33.50%), Postives = 99/197 (50.25%), Query Frame = 3
Query:  156 RAGIAEFIATFLFLYISVLTVMGV--VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAI 737
            +A +AEFIAT LF++  V + +    +         G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   + Y V Q LGA     +++ ++  GQ     G       G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA           ARS G A+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQ-YVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16
Identity = 64/201 (31.84%), Postives = 93/201 (46.27%), Query Frame = 3
Query:  159 AGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG--------IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAI 737
            A + EF  TF+FL+ +   V+  V ++    T   +G        IA  FG  +   ++C AG+SGG +NPAV+L L LAR +S  R +     Q +     AG+  G   +          N +  G ++  GL  E+ GT VL  TV      KR         +A LPIG ++F+ H+A           ARSLGAA+
Sbjct:   50 AAVGEFCGTFMFLWCAY--VICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQII-----AGMAAGGAASAMTPGKVLFTNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAV 238          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16
Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 3
Query:  153 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            +R  + E + TF  +++ V        S T  S   +  IA+ FG  +  +      +SG HINPAVTLG  +  ++S+ +A FY+++QC+GAI GA V+K  +     G L  G +           +  E + TF+LV+ V + +D  R      +   APL +G A+   HL            ARS G A++
Sbjct:   23 WRMLLGELVGTFFLIFVGV-------GSTTSGS---VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL--GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV 202          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.727e-16
Identity = 68/214 (31.78%), Postives = 102/214 (47.66%), Query Frame = 3
Query:  117 LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK---GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            ++ PG LK      A +AEFI+T +F++    + M   K     +T   G+   A A    +FV V   A ISGGH+NPAVT G F+   ++L R L Y + Q LG+     +++   G +  G +G           G +  + L  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L            A S G A++
Sbjct:   14 VYHPGALK------AALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG---------LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV 208          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16
Identity = 70/212 (33.02%), Postives = 100/212 (47.17%), Query Frame = 3
Query:  126 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-LGA---EIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            P E       +A +AEFI+T +F+     + M   K     +T   G+   A A    +FV V   A ISGGH+NPAVT G F+   ++L R + Y + Q LG++    ++K            GG  V A G + G G L A   EI+ TF LVYTV+ +A D K  +    +  +AP+ IGF V    LA           A + G A++
Sbjct:   11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK---------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV 209          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16
Identity = 65/198 (32.83%), Postives = 94/198 (47.47%), Query Frame = 3
Query:  156 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAIIYNK 749
            RA  AEF+AT L+++  V +VM         +   +  IA  F  +  + V  T   SG H NPAVTL   +   +SL RA+ Y+  Q +GA  GA ++ G M       L  G NVV +  + G  +  E++ T  LV  VF++TD+++++            IG +V L HL            ARS G AII  K
Sbjct:   25 RALFAEFLATGLYVFFGVGSVM-----RWPTALPSVLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETL--GINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK 209          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16
Identity = 64/202 (31.68%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  156 RAGIAEFIATFLFLYISVLT--VMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG----LGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            RA +AEFI+T +F++    +      +  N   +  G+   A A    +FV V   A ISGGH+NPAVT G+ L   ++L R + Y + Q LG++    ++             GG  + A G + G G    L  EI+ TF LVYTV+ +A D K  +    +  +AP+ IGF V    LA           A + G A++
Sbjct:   22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL---------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV 210          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.276e-15
Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 3
Query:  156 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV----GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            RA I+EFIAT +F++ +  +V+ + K     ST+    G+  +A A    + V V     +SGGH+NPAVT G  +  ++SL RA+ Y   Q LGA+    +++   G  +    A     +A G   G  +  E + TF  VY  + +  D KR     H+  +APL +GF +    LA           AR  G A++
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFA-----LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV 218          
The following BLAST results are available for this feature:
BLAST of CN189638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
TIP1_MEDSA3.358e-1633.00Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_MAIZE4.385e-1633.00Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP23_MAIZE4.385e-1633.50Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQY2_YEAST4.385e-1631.84Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQP_DROME4.385e-1630.10Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP11_ORYSJ5.727e-1631.78Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP11_ARATH7.480e-1633.02Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
AQP6_HUMAN7.480e-1632.83Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
TIP12_ARATH9.769e-1631.68Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP32_MAIZE1.276e-1531.00Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C24_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189638 ID=CN189638; Name=CN189638; organism=Citrus sinensis; type=EST; length=751bp
GAGGCAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGG
CAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGCAAGGACTACGTTGA
ACCCCCACCGGCGCCGCTCTTCGAGCCCGGCGAGCTCAAGTCTTGGTCGT
TTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTAC
ATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTC
AACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCG
TGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCG
GTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACT
TTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTG
TTAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCC
AACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGAT
TATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCA
AACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATT
GGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGGAAC
TGGCATCACCCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACAAGG
A
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