CN189638

Overview
NameCN189638
Unique NameCN189638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:91..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.006e-20
Identity = 71/206 (34.47%), Postives = 100/206 (48.54%), Query Frame = 3
Query:  132 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAIIYNK 749
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +RS           L IGF+V L HL            ARSL  A++  K
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLA--VNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK 197          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.538e-20
Identity = 70/206 (33.98%), Postives = 100/206 (48.54%), Query Frame = 3
Query:  132 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAIIYNK 749
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I +LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL            ARSL  A++  K
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLA--VNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK 197          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.539e-20
Identity = 66/203 (32.51%), Postives = 96/203 (47.29%), Query Frame = 3
Query:  132 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            E +S+SF+RA  AEF  T  +++  +   +             +  IA AFG ++  +V     +SG HINPAVT    +  ++SL RA+FY+  Q LGA+ GA V+ G   A   G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L IGF++ L HL            ARS   A++
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL-----KWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVL 194          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.245e-19
Identity = 67/197 (34.01%), Postives = 96/197 (48.73%), Query Frame = 3
Query:  147 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAI 737
            + +R   AE I T L + I   +  GV  S        +  IA  FG +I  +V C   +SG HINPAVT GL +   +S+ +A+FY+++QC+GAI G+ ++K    A   G L      +A G T   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA           ARS G A+
Sbjct:   24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISEGDV----VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLC--MTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV 210          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.535e-19
Identity = 72/214 (33.64%), Postives = 104/214 (48.60%), Query Frame = 3
Query:  120 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA           ARS G A++
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.535e-19
Identity = 72/214 (33.64%), Postives = 104/214 (48.60%), Query Frame = 3
Query:  120 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA           ARS G A++
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19
Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 3
Query:  132 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ YM  Q LGA+ GA V+     A   G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL            ARS   AI+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18
Identity = 67/197 (34.01%), Postives = 97/197 (49.24%), Query Frame = 3
Query:  156 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAI 737
            +A +AEFI+T +F++  V + +   K          G+  +A   G  +FV V   A ISGGH+NPAVT GL L  ++++   +FY + Q LGAI GA +V+   G         G           +G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L            ARS G A+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGAF-------EGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAV 205          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18
Identity = 69/208 (33.17%), Postives = 102/208 (49.04%), Query Frame = 3
Query:  126 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAII 740
            PGEL      +A +AEFI+T +F++    + M   K       +  G+   + A    +FV V   A ISGGH+NPAVT G F+   +SL +AL Y V Q LG++    ++K   G    G  +  A V A      + +  E++ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA           A S G A++
Sbjct:   11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAM-----NAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209          
BLAST of CN189638 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18
Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = 3
Query:  129 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLAXXXXXXXXXXXARSLGAAI 737
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   +FY V Q LGA   A ++ GF+  G+    A   + VA G ++ +G+  E++ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA           ARS G A+
Sbjct:   10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGK----AIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
The following BLAST results are available for this feature:
BLAST of CN189638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
AQP2_MOUSE5.006e-2034.47Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQP2_RAT6.538e-2033.98Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
MIP_RANPI8.539e-2032.51Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP_CICVR3.245e-1934.01Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP2_TOBAC5.535e-1933.64Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC5.535e-1933.64Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
MIP_RABIT7.228e-1933.00Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP22_ORYSJ1.610e-1834.01Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE1.610e-1833.17Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP21_MAIZE2.747e-1835.44Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C24_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189638 ID=CN189638; Name=CN189638; organism=Citrus sinensis; type=EST; length=751bp
GAGGCAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGG
CAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGCAAGGACTACGTTGA
ACCCCCACCGGCGCCGCTCTTCGAGCCCGGCGAGCTCAAGTCTTGGTCGT
TTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTAC
ATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTC
AACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCG
TGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCG
GTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACT
TTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTG
TTAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCC
AACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGAT
TATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCA
AACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATT
GGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGGAAC
TGGCATCACCCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACAAGG
A
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