CN189627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189627 vs. ExPASy Swiss-Prot
Match: FWA_ARATH (Homeobox-leucine zipper protein HDG6 OS=Arabidopsis thaliana GN=HDG6 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.260e-13 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = -2 Query: 405 MLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 773 ML+LQE DA+G++VVYAPV+ ++ +V G +S V LPSGF+IVPDG + LLT QILV PTA L +V++V L++ T+ KIK+AL ++ Sbjct: 577 MLVLQEIWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGVNG-------------SYHRGNTGGGCLLTFGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSALDLQT 686
BLAST of CN189627 vs. ExPASy Swiss-Prot
Match: HDG8_ARATH (Homeobox-leucine zipper protein HDG8 OS=Arabidopsis thaliana GN=HDG8 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.665e-13 Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 411 MLILQETCTDAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLP--TAKLTVESVETVNNLISCTVQKIKAALQC 773 ML+LQ+ DA G ++VYAP+D+ MH ++G D +++ +LPSGF I DG S +LLTVAFQILV+ + ++ +SV+TV+ LIS T+Q+IK L C Sbjct: 590 MLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGFVISSDGRRS-----------------TVEDGGTLLTVAFQILVSGKANRSREVNEKSVDTVSALISSTIQRIKGLLNC 696
BLAST of CN189627 vs. ExPASy Swiss-Prot
Match: HDG9_ARATH (Homeobox-leucine zipper protein HDG9 OS=Arabidopsis thaliana GN=HDG9 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.393e-12 Identity = 52/126 (41.27%), Postives = 66/126 (52.38%), Query Frame = -2 Query: 408 MLILQETCTDAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNS---LPTAKLTVESVETVNNLISCTVQKIKAALQCE 773 ++ILQ++ DA G +V YAP+D+ ++G D + +LPSGF I DG S G LLTVAFQILV+ P L V S TVN LIS TVQ+IKA L+CE Sbjct: 608 LMILQDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTIPILPSGFMISRDGRPSEGEAEGGSYT--------------LLTVAFQILVSGPSYSPDTNLEV-SATTVNTLISSTVQRIKAMLKCE 718
BLAST of CN189627 vs. ExPASy Swiss-Prot
Match: ROC9_ORYSJ (Homeobox-leucine zipper protein ROC9 OS=Oryza sativa subsp. japonica GN=ROC9 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11 Identity = 45/123 (36.59%), Postives = 69/123 (56.10%), Query Frame = -2 Query: 405 ILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGF-AIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVN-SLPTAKLTVESVETVNNLISCTVQKIKAALQCES 767 +LQ+ CT+ S + YA +D A+ V+ G DS+ V LLP GF +++PDG +S+ + SL+TVAFQ+ + S A L+ +SVE V L+S T++ I+ AL C+S Sbjct: 694 VLQDVCTNPCESTIAYAAIDAAALQPVIAGHDSSGVHLLPCGFISVMPDGLESKPAV-----ITASRRGGEASGAGSLVTVAFQVPASPSAAAATLSPDSVEAVTVLVSSTLRNIRKALGCDS 811 The following BLAST results are available for this feature:
BLAST of CN189627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189627 ID=CN189627; Name=CN189627; organism=Citrus sinensis; type=EST; length=777bpback to top |