DR908806

Overview
NameDR908806
Unique NameDR908806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908806 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11
Identity = 46/150 (30.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:   14 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTAL-DWNSRIKIALGTARGIAFIHSEGSAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATR---TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 451
            KH N++  +          ++  Y   G L+ +L   R      L +W++      G A G+ ++H     K  H ++KS NVL+T      ISD G +  ++  +T      T+ + APEV      S+K D++SFGVLL E+LTG+ P
Sbjct:  215 KHPNIIAFKGVCTQAPCYCILMEYCAQGQLYEVLRAGRKVTPKLLVEWST------GIASGMNYLHLH---KIIHRDLKSPNVLVTHADTVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIP 355          
BLAST of DR908806 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 2
Query:   71 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRIKIALGTARGIAFIHSEGSAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI-----NFPTTATRTIGYRAPEV-TETRKASQKSDVYSFGVLLLEMLTGKAPLQH 460
            +V  Y+  GSLF LLH  +      LD  S++ IA+  A+G+ ++HS  +    H ++ S N+LL +D +  ++D G +  +     +  T     + + APEV T+  + + K+DV+S+ + L E+L G+ P  H
Sbjct:  536 IVTQYISGGSLFSLLHEQKR----ILDLQSKLIIAVDVAKGMEYLHSL-TQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLIGEIPFAH 666          
BLAST of DR908806 vs. ExPASy Swiss-Prot
Match: M3KL4_MOUSE (Mitogen-activated protein kinase kinase kinase OS=Mus musculus GN=Mlk4 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11
Identity = 49/163 (30.06%), Postives = 79/163 (48.47%), Query Frame = 2
Query:   14 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR-------IKIALGTARGIAFIHSEGSAKFTHGNIKSSNVLLTQDLNG---C-----ISDVGLAHLINFPT--TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 451
            +H N++ +R     +    +V  +   G+L   L    SD        +R       +  A+  ARG+ ++H E      H ++KSSN+LL + +     C     I+D GLA   +  T  +A  T  + APEV  +   S+ SD++S+GVLL E+LTG+ P
Sbjct:  165 RHPNIIQLRGVCLRQPHLCLVLEFARGGALNRALAAAASDPRAPGPRRARRIPPQVLVNWAVQIARGMLYLHEEAVVPILHRDLKSSNILLLEKIEHDDICNKTLKITDFGLAREWHRTTRMSAAGTYAWMAPEVIRSSLFSKGSDIWSYGVLLWELLTGEVP 327          
BLAST of DR908806 vs. ExPASy Swiss-Prot
Match: STE20_NEUCR (Serine/threonine-protein kinase ste-20 OS=Neurospora crassa GN=ste-20 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 2
Query:   17 HSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRIKIALGTARGIAFIHSEGSAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 451
            H N+V     Y    E  VV  YM  GSL  ++  N    G          +   T RG+  +HS+G     H +IKS N+LL+ + N  ++D G    IN      TT   T  + APEV   ++  +K D++S G++ +EM+ G+ P
Sbjct:  728 HPNIVNFIDSYLCAGELWVVMEYMEGGSLTDVVTFNIMTEGQIAS------VCRETLRGLQHLHSKG---VIHRDIKSDNILLSMEGNIKLTDFGFCATINEAQSKRTTMVGTPYWMAPEVVTRKEYGRKVDIWSLGIMAIEMIEGEPP 867          
BLAST of DR908806 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 2
Query:   14 KHSNVVPVRAYYYS--KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNS--RIKIALGTARGIAFIHSEGSAKFTHGNIKSSNVLLT-------------QDLNGCISDVGLAHL-INFPTTATRTIG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 457
            +H NVV       +  +D   +V  +M  GSL   L    +D    L+ N   R+K+AL  A+G+ ++H   +    H ++ S N+LL              QD+   ISD GL+ L +   +  T+++G   Y APEV +    S+KSDVYS+G++L E+LT   P Q
Sbjct: 2169 RHPNVVQFLGACTAGGEDHHCIVTEWMGGGSLRQFL----TDHFNLLEQNPHIRLKLALDIAKGMNYLHG-WTPPILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLSRLKMEQASQMTQSVGCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLTSDEPQQ 2332          
BLAST of DR908806 vs. ExPASy Swiss-Prot
Match: NEK1_HUMAN (Serine/threonine-protein kinase Nek1 OS=Homo sapiens GN=NEK1 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 46/151 (30.46%), Postives = 71/151 (47.02%), Query Frame = 2
Query:   14 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRS---DGGTALDWNSRIKIALGTARGIAFIHSEGSAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRT-IG---YRAPEVTETRKASQKSDVYSFGVLLLEMLTGK 445
            KH N+V  R  +       +V  Y   G LF  ++  +         LDW  +I +AL        +H     K  H +IKS N+ LT+D    + D G+A ++N      RT IG   Y +PE+ E +  + KSD+++ G +L E+ T K
Sbjct:   59 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 200          
The following BLAST results are available for this feature:
BLAST of DR908806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 306
Match NameE-valueIdentityDescription
M313B_XENLA5.608e-1130.67Mitogen-activated protein kinase kinase kinase 13-... [more]
TNI3K_MOUSE7.324e-1130.88Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
M3KL4_MOUSE7.324e-1130.06Mitogen-activated protein kinase kinase kinase OS=... [more]
STE20_NEUCR9.566e-1131.54Serine/threonine-protein kinase ste-20 OS=Neurospo... [more]
PYK1_DICDI9.566e-1132.54Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
NEK1_HUMAN9.566e-1130.46Serine/threonine-protein kinase Nek1 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16934 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-54_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908806 ID=DR908806; Name=DR908806; organism=Citrus sinensis; type=EST; length=508bp
AGGGAGGATTGGAAAGCACTCAAATGTGGTGCCAGTCCGTGCTTATTACT
ACTCAAAGGATGAGAAGCTTGTAGTCTACAGCTACATGCCTGCGGGTAGC
TTGTTCATGCTCTTGCATAGAAATAGAAGTGACGGTGGAACTGCACTGGA
TTGGAATTCAAGAATTAAAATTGCTCTTGGTACTGCTAGGGGGATTGCTT
TCATCCATTCCGAGGGTAGTGCTAAATTCACACACGGCAACATCAAATCC
TCCAATGTCCTACTCACCCAAGACCTTAATGGTTGCATATCTGACGTTGG
CTTGGCTCATCTGATCAATTTCCCAACAACCGCAACTCGAACCATAGGGT
ACCGTGCCCCAGAAGTAACTGAGACCCGGAAAGCGTCTCAAAAATCCGAT
GTTTATAGCTTCGGTGTGCTCCTCCTGGAAATGCTGACAGGCAAAGCCCC
TCTCCAACACTCGGGCCATGACGATGTGGTTGATCTTCCAAGATGGGTCC
GTTCTGTT
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