CN189625

Overview
NameCN189625
Unique NameCN189625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2673 contig Csv1_Contig2673:608..1319. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.817e-70
Identity = 130/144 (90.28%), Postives = 138/144 (95.83%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFV +M  K
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVNMMTNK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.817e-70
Identity = 129/144 (89.58%), Postives = 138/144 (95.83%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70
Identity = 130/144 (90.28%), Postives = 140/144 (97.22%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            +++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    6 SNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70
Identity = 130/144 (90.28%), Postives = 140/144 (97.22%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            +++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    6 SNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70
Identity = 128/144 (88.89%), Postives = 140/144 (97.22%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            +++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREAD+DGDGQINYEEFVK+M++K
Sbjct:    6 SEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 4.805e-70
Identity = 128/144 (88.89%), Postives = 139/144 (96.53%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 264.233 bits (674), Expect = 4.805e-70
Identity = 128/144 (88.89%), Postives = 140/144 (97.22%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEV+ADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 6.276e-70
Identity = 128/144 (88.89%), Postives = 140/144 (97.22%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.197e-70
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of CN189625 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.197e-70
Identity = 128/144 (88.89%), Postives = 139/144 (96.53%), Query Frame = -3 
Query:  256 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 687
            T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
The following BLAST results are available for this feature:
BLAST of CN189625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CALM_CIOIN2.817e-7090.28Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_CAEEL2.817e-7089.58Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CALM_TRYBG3.679e-7090.28Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB3.679e-7090.28Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_PLECO3.679e-7088.89Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_STIJA4.805e-7088.89Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_MYXGL4.805e-7088.89Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALM_RENRE6.276e-7088.89Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_STYLE8.197e-7090.28Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PYUSP8.197e-7088.89Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189625 ID=CN189625; Name=CN189625; organism=Citrus sinensis; type=EST; length=713bp
TTTTTTTTTTTTTTTTCATAGAACAGCAGAACAACTAAAATAATAAAAAC
CGAAAAGTTTTGCGAGTCACAAGACATATTGACGAGGGAGACAACATTCT
TCCTACACCATCAGGCCCATCACCATTAAAAGACCATTGCTTCCTTTAGC
CTGACCCTCATGACTATCAAATTAAAAATTGTAAAAGAGAAAACTAGGAA
TCCCTTTATAATTTAGTCAACCCATTTTATAAGTATTGGTGGGTTGGGGT
CATTACTTGGCCATCATAACCTTGACAAATTCCTCATAATTTATCTGGCC
ATCACCATCAACATCAGCTTCCCTTATCATCTCATCAACTTCTTCATCAG
TAAGTTTCTCTCCTAGGTTTGTCATCACATGGCGCAGCTCAGCAGCTGAG
ATGAAACCATTCTGATCCTTGTCGAAAACCCGGAAGGCCTCTTTCAGCTC
CTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATGAGGTTTAGGAATT
CAGGAAAATCAATAGTTCCATTACCATCAGCATCCACTTCATTGATCATG
TCCTGGAGCTCAGCCTCAGTGGGGTTCTGACCCAGTGACCTCATAACAGT
GCCAAGCTCCTTGGTGGTAATGCAACCGTCGCCATCCTTGTCAAACAAGC
TGAAGGCCTCTTTGAACTCAGAGATCTGATCGTCCGTGTTTATTTAAAAT
AAAATTATTAGAT
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