CN189619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.064e-32 Identity = 83/175 (47.43%), Postives = 111/175 (63.43%), Query Frame = -2 Query: 327 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQ---EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 839 ++E+KRIEN NRQVTF+KRR GLLKKA+ELSVLCDAE+ LIIFS+ GKL+E+ S SSSM K +ERYQK VS E +Q E ++K E LQ + R ++GE+L L EL L +QL+ + ++RS + Q ML L L+ KE++L + N L + L E Sbjct: 5 KIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQK---------VSGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAE 170
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.390e-32 Identity = 79/166 (47.59%), Postives = 109/166 (65.66%), Query Frame = -2 Query: 342 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLK 839 R ELKRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF S+ S+ KT++RY+ Y N + + + L L + EAL S+R +LGE L + +EL LE +L+ SL IR +T+ + + +L+ KE+ L + N+ L+ Sbjct: 5 RTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKA--YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLR 168
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.370e-32 Identity = 82/168 (48.81%), Postives = 113/168 (67.26%), Query Frame = -2 Query: 336 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 839 + E+KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVAL+IFS R KLYEF SSSS+ T+ERYQ+ N R ++ E L + E L+ S+R LLGE + + +EL+ LE QLD SL +IR+ + Q + + + +L+ +E+ L + NK LK++ Sbjct: 5 KTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEF-SSSSIAATIERYQR--RIKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.176e-31 Identity = 86/232 (37.07%), Postives = 135/232 (58.19%), Query Frame = -2 Query: 186 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQR-SQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQ-VNTLQLNPSAEDCGYGLKPAQPQGDTFF-----------HALECEP-TLQIGYQPA 839 ++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T+ERY+K N A E QQE KL+ + +LQ + R ++G+ + ++ ++L+ +E +L+ + +IR+ + + + + +Q +E L N L+ +++E + L + +A Y P F +A + +P TLQ+G QPA Sbjct: 5 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVKSTVERYKKANSDTSNSGTVA-EVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERGQQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQLQPTTLQLGQQPA 234
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.007e-31 Identity = 81/171 (47.37%), Postives = 118/171 (69.01%), Query Frame = -2 Query: 336 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ---KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 839 + ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+S+ KT+ERY+ K N G N + ++ +E + + L + EAL+ +R LLGE+L + +EL SLE +L+ SL IR +T+ + + + +L+ KE L + N+ L+++ Sbjct: 5 KTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQ-KTIERYRTYTKENIG----NKTVQQDIE-QVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREK 169
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 9.958e-31 Identity = 73/170 (42.94%), Postives = 111/170 (65.29%), Query Frame = -2 Query: 333 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 839 ++ ++RI+N +RQVTF+KRRNG+ KKA EL++LCDAEV L+IFS+ G+LYE+ SS+SM ++RY K E A EL Q+E L+ + LQ + R L+GE+L LN KEL+SLE QL++SL+ +R+ + ++D + EL K L+ + N L +++ Sbjct: 5 KIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY-SSTSMKSVIDRYGK---SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKI 170
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 9.958e-31 Identity = 91/243 (37.45%), Postives = 135/243 (55.56%), Query Frame = -2 Query: 126 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMLKTLERYQKCNYGAPEPNVSAR-EALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTA---GPSLNNYMQGWL 839 +V+++RIEN+++RQVTF+KRR GLLKKA+E++VLCD +VA I+FS +G L+ + SS ++M + LE+Y + + NV LE S +++KL+ R EAL++SQRNL+G+EL L ++++ LE Q+D SL IRS KE+LL E N L++++ E + TL A PA D F P L I + VTA S NN + W+ Sbjct: 5 KVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKKITE---LETLHTCIRASPTKAAAPPACNTADAFV------PNLNICCGDSGEPETVTAPLGWTSSNNGLPWWM 224
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.784e-30 Identity = 79/205 (38.54%), Postives = 126/205 (61.46%), Query Frame = -2 Query: 234 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ-KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQ--GDTFF 839 +V+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E ++ +M +ERYQ G EP R+ + ++Q L+ + LQR R+ G G + +L +LE+ L++ + QIR+T+ Q M + L++KE +L EAN+ L++++ E ++ L+ ++ +P QP G+ FF Sbjct: 5 KVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQKLYMSLLDLHSQ------QPTQPMTYGNRFF 200
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.101e-29 Identity = 73/177 (41.24%), Postives = 108/177 (61.02%), Query Frame = -2 Query: 327 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKC---NYGAPEPNVSAREALE---LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 839 +++LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ ++IFS +GKL+E + +M +++Y KC G+ +A+E L+ L + E LK E LQ+ + G G +N +EL LE+ L+ + QIRS + ML + L++KE +L NK L +++ E Sbjct: 5 KIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEKIEE 181
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.203e-29 Identity = 73/177 (41.24%), Postives = 110/177 (62.15%), Query Frame = -2 Query: 312 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 839 ++ ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F +SSSM ++RY K E A E+ Q+E L+ ALQ + R ++GE+L L+ EL SLE Q+++SL+ IR + Q + + EL K L+ + N L +++ +Q N Sbjct: 5 KIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF-ASSSMKSVIDRYNKSKI---EQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQEN 177 The following BLAST results are available for this feature:
BLAST of CN189619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189619 ID=CN189619; Name=CN189619; organism=Citrus sinensis; type=EST; length=840bpback to top |