CN189619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.179e-23 Identity = 71/171 (41.52%), Postives = 105/171 (61.40%), Query Frame = -2 Query: 333 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLS-EANKTLKQRL 839 ++E+KRIEN NRQVT++KRR G++KKA EL+VLCDA+VA+I+FS+ GK +EFCS S+ +K + +RYQ+ S + Q+ LK L+ R +GE+L L EL LE+ +D +LK++R R +++ T TE K+ S EA +TL+Q L Sbjct: 5 KIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRH-RKYHVITTQTETYKKKVKHSYEAYETLQQEL 168
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.540e-23 Identity = 69/206 (33.50%), Postives = 115/206 (55.83%), Query Frame = -2 Query: 252 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSML-KTLERYQKCN----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL-----KQRLMEGYQVNTLQLNPSAEDCGYGLKPAQP 839 ++E+KRIEN NR VTF+KRRNGL+KKA E++VLCDA+VALIIF++ GK+ ++C S L L++YQK + + A N+S E ++K ++LQ R+L GE++ LN K L ++E ++ L ++R + ++ L + E++++E + L +Q + + + GY ++P QP Sbjct: 5 KIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLS----------NEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVR----DHQMEILISKRRNEKMMAEEQRQLTFQLQQQEMAIASNARGMMMRDHDGQFGYRVQPIQP 196
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.540e-23 Identity = 68/171 (39.77%), Postives = 102/171 (59.65%), Query Frame = -2 Query: 327 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 839 ++E+KRIEN NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S++ L++Y K +A + E K+K + +Q R+L GE++ LN +EL LE LD L IR+ + D L ++ K Q + E L +L + Sbjct: 5 KIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHKLT------GRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQN----DLLRMMRKKTQSMEEEQDQLNWQLRQ 164
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.540e-23 Identity = 66/170 (38.82%), Postives = 104/170 (61.18%), Query Frame = -2 Query: 339 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 839 ++E+KRIEN NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S++ L++Y K ++ R L+ + E K+K + +Q R+L GE++ LN +EL LE L+ L IR+ + + + + Q E+ + N L+Q Sbjct: 5 KIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHK---------LTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQ 164
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.627e-23 Identity = 74/208 (35.58%), Postives = 110/208 (52.88%), Query Frame = -2 Query: 219 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS-MLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALEC 839 ++E+K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+FS GKL EFCS + M + ++RY N G P+ + +L + E L+ + L+ R G +L + EL+ LERQL+ S+ ++R + + M L L K ++L E N + + L E Q G KP + Q F L+C Sbjct: 5 KIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTN-GLRLPD-HHDDQEQLHHEMELLRRETC--NLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHEHRAAMEFQ------QAGIDTKPGEYQ--QFIEQLQC 200
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.304e-22 Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = -2 Query: 345 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 839 ++++KRIEN+ NRQVT++KRRNGL KKA EL+VLCDA+V++I+ S+ GKL+EF S S K L + YQK V + Q++ KLK L++ R +GE L LN ++LE L +D SLK IR + + + + + + K + + E ++ L Sbjct: 5 KIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQK------TVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNL 164
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.224e-22 Identity = 60/175 (34.29%), Postives = 109/175 (62.29%), Query Frame = -2 Query: 327 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 839 ++E+KRIEN NRQVT++KRRNG++KKA E+SVLCDA V++IIF++ GK++EFCS S++++ L+ Y K +S + + + E ++K +++Q R+L GE++ LN KEL LE L+ +++ + ++ + ++ +++ E N++L+ +L + Sbjct: 5 KIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHK---------LSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEF----VRMMRKHNEMVEEENQSLQFKLRQ 166
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.470e-22 Identity = 68/190 (35.79%), Postives = 111/190 (58.42%), Query Frame = -2 Query: 333 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERY--QKCNYGA--PEPNV--------------SAREALELSSQQEYLKLKARYEALQRSQ---RNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 839 R E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F +SS+M + +++Y N G +P++ ++ + L Q E+ K + E L + R + GEEL L+ +EL+ +E+ L+ L+++ T+ Q + ++ELQ K L+E N L+ ++ Sbjct: 5 RREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 193
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.470e-22 Identity = 58/181 (32.04%), Postives = 103/181 (56.91%), Query Frame = -2 Query: 300 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNS-KELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL 839 ++E+KRIE+ RQVTF+KRR G LKKA EL+VLCDA+V +++FS++GKL++FCS +L +E + + + + E +L+ + L+ S R GE+L +++ EL L+ QL+ SL ++ + + + M L +++ Q + E N L + + + +N + + Sbjct: 5 KIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVIL--MELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMVTKILLLNVITI 183
BLAST of CN189619 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.450e-22 Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = -2 Query: 378 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK 839 RVELK+IEN NRQVTF+KRR GLLKKA EL++LCDA++ +I+FS GK+YE+ S + + +RY K AP + ++ QE ++K L+ R +G++L L +++ +LE+Q++ SL ++R + Q + L E+ + Sbjct: 5 RVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLK----APSTRFEEMD-VQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154 The following BLAST results are available for this feature:
BLAST of CN189619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189619 ID=CN189619; Name=CN189619; organism=Citrus sinensis; type=EST; length=840bpback to top |