CN189617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189617 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.107e-30 Identity = 63/126 (50.00%), Postives = 94/126 (74.60%), Query Frame = -1 Query: 280 KNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 657 KNG++VIK PCK+V++STSKTGKHGHAK + IDIF GKK E+I PS+HN D P+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + +I EGK+ +V+V+S++G+E + ++K Sbjct: 32 KNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CN189617 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.934e-29 Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = -1 Query: 280 KNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLL-TETGNTKDDLRLPTDENLLSQIKDGFAEGK-DLVVTVMSSMGEEQICALK 657 KN +++IK RPCK+VE+STSKTGKHGHAK H V IDIF KKLEDI PS+HN D P V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L QI+D + + + ++V V+S++GEE I K Sbjct: 31 KNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWK 156
BLAST of CN189617 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 65/128 (50.78%), Postives = 90/128 (70.31%), Query Frame = -1 Query: 280 KNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLL-TETGNTKDDLRLPTDENLLSQIKDGFAEGK-DLVVTVMSSMGEEQICALK 657 KN +++I+ RPCK+VE+STSKTGKHGHAK H V IDIF KKLEDI PS+HN D P V R +Y L+ I EDGF SL+ E+ KDDL++P + +L + I++ + + ++V V+++ GEE I K Sbjct: 31 KNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMP-EGDLGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156
BLAST of CN189617 vs. ExPASy Swiss-Prot
Match: IF5A_METKA (Translation initiation factor 5A OS=Methanopyrus kandleri GN=eif5a PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12 Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = -1 Query: 277 KNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKD 657 K YI+I + PCK+VE +TS GKHG AK V + +F+GKK P D P + R Q++ D + ET T +++ P DE L SQ++ G +V M + G+ +I +K+ Sbjct: 15 KGKYIMIDDEPCKIVEYTTSSPGKHGSAKARIVAVGLFDGKKRTLTKPVDAKVDVPVIERKTAQVVSDMGDTVQLMDMETYET-FEVQKPEDEELASQLEPG------TMVEYMEAAGKRKIVGIKE 134
BLAST of CN189617 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12 Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = -1 Query: 280 YIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 648 +IVI PCKVVEV SKTGKHG AK VGI F+G K +VP+ + P + + Q++ D V L+ + ++ +P +E + S++ +G + V V MG +I ++ Sbjct: 16 FIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEG------VEVEVWEVMGRHKIMRVR 131
BLAST of CN189617 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11 Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -1 Query: 280 KNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 657 + YIVI PC+VVEV+ +KTGKHG AK + + + IF G K + P + P + + Q+I D + ET T ++ +PT+E++ S+IK KD V MG ++I +K Sbjct: 13 EGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131
BLAST of CN189617 vs. ExPASy Swiss-Prot
Match: IF5A_PYRHO (Translation initiation factor 5A OS=Pyrococcus horikoshii GN=eif5a PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11 Identity = 39/126 (30.95%), Postives = 63/126 (50.00%), Query Frame = -1 Query: 271 YIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIG 648 YI+I + PC++V ++ S GKHG AK + IF+GK + P+S D P + + Q+I I+ D + ET T +P D + +I+D EG + V ++G +I +K G Sbjct: 17 YIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDMETYET---FEVPIDTGVADEIRDQLKEG--INVEYWETLGRIKIMRIKGEG 137 The following BLAST results are available for this feature:
BLAST of CN189617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189617 ID=CN189617; Name=CN189617; organism=Citrus sinensis; type=EST; length=657bpback to top |