CN189611

Overview
NameCN189611
Unique NameCN189611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT21_ARATH (Sulfate transporter 2.1 OS=Arabidopsis thaliana GN=SULTR2;1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.460e-29
Identity = 68/155 (43.87%), Postives = 95/155 (61.29%), Query Frame = 1
Query:  226 PPQPFFNSLKYNLKETFFPD-DPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCFSS 687
            PP P+ + LK  +K +F       +  + +P  K+ +  LQ +FPIF W   Y     K DL+AG+T+ASL IPQ I YA LA L P  GLY+S VPPL+YA+MG+S+++A+G VAV SLLI+S L + ++   +P  Y  L  T TFF   F +
Sbjct:   59 PPSPW-HELKRQVKGSFLTKAKKFKSLQKQPFPKQILSVLQAIFPIFGWCRNYKLTMFKNDLMAGLTLASLCIPQSIGYATLAKLDPQYGLYTSVVPPLIYALMGTSREIAIGPVAVVSLLISSMLQKLIDPETDPLGYKKLVLTTTFFAGIFQA 212          

HSP 2 Score: 21.557 bits (44), Expect = 1.460e-29
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2
Query:  665 FFAGVFQAS 691
            FFAG+FQAS
Sbjct:  205 FFAGIFQAS 213          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT3_STYHA (Low affinity sulfate transporter 3 OS=Stylosanthes hamata GN=ST3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 1
Query:  223 PPP--QPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCFSS 687
            PPP  + F   LK N    FF        K +  +  F+  L   FPI  W   YS    K DL++G+T+ASL+IPQ I YA LA L P  GLY+S +PP++YA+MGSS+++A+G VAV S+L++S + + ++ + +P  Y +L FT T F   F +
Sbjct:   22 PPPLTKKFLGPLKDN---KFFTSSSS---KKETRAVSFLASL---FPILSWIRTYSATKFKDDLLSGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPVIYALMGSSREIAIGPVAVVSMLLSSLVPKVIDPDAHPNDYRNLVFTVTLFAGIFQT 169          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT22_ARATH (Sulfate transporter 2.2 OS=Arabidopsis thaliana GN=SULTR2;2 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  304 KNKPASKKFILG-LQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCFSS 687
            K K +S   +   L+  FPI  W  +Y     K DL+AG+T+ASL IPQ I YA LA L P  GLY+S VPPL+Y+ MG+S++LA+G VAV SLL++S +    +   +P  Y  + FT TFF   F +
Sbjct:   57 KTKNSSSNLVYSCLKSAFPILSWGRQYKLNLFKKDLMAGLTLASLCIPQSIGYANLAGLDPEYGLYTSVVPPLIYSTMGTSRELAIGPVAVVSLLLSSMVRDLQDPVTDPIAYRKIVFTVTFFAGAFQA 185          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: NO70_SOYBN (Early nodulin-70 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23
Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 1
Query:  205 AHRVAIPPPQP--FFNSLKYNLKETFFPDDPLRLF---KNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCF 681
            AH+  +  P+P      +  N+KET  P      F   +N+P SK+    LQ +FPI      Y+ Q LK DL+AG+T+A  AIPQ +  A LA L P  GLY+  VPPL+YA++ SS+++ +G  +V SLL++S +        +   Y+ L FT TFF   F
Sbjct:    2 AHQWVLNAPEPPSMLRQVVDNVKETLLPHPNPNTFSYLRNQPFSKRAFALLQNLFPILASLQNYNAQKLKCDLMAGLTLAIFAIPQCMGNATLARLSPEYGLYTGIVPPLIYAMLASSREIVIGPGSVDSLLLSSMIQTLKVPIHDSSTYIQLVFTVTFFAGIF 165          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT41_ARATH (Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1
Query:  349 VFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLA 651
            +FP F W   Y + ++ K DL+AGIT+  + +PQ +SYAKLA LPPI GLYSSFVP  VYAI GSS+ LA+G VA+ SLL+++ LG   + NE  +L++ LA
Sbjct:   79 LFPCFRWIRTYRWSEYFKLDLMAGITVGIMLVPQAMSYAKLAGLPPIYGLYSSFVPVFVYAIFGSSRQLAIGPVALVSLLVSNALGGIADTNE--ELHIELA 178          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT42_ARATH (Probable sulfate transporter 4.2 OS=Arabidopsis thaliana GN=SULTR4;2 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21
Identity = 65/172 (37.79%), Postives = 89/172 (51.74%), Query Frame = 1
Query:  175 YPSSKENVENAHRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCFSS 687
            YP S  +  + H +   P   FF+     +K   F D                  +  +FP F W   Y + Q+ K DL+AGIT+  + +PQ +SYA+LA L PI GLYSSFVP  VYA+ GSS+ LAVG VA+ SLL+++ L   V+ +E  +LY  LA         F S
Sbjct:   28 YPDSTSSDPHCHSI---PFNDFFSRWTAKIKRMTFFD-----------------WIDAIFPCFLWIRTYRWHQYFKLDLMAGITVGIMLVPQAMSYARLAGLQPIYGLYSSFVPVFVYAVFGSSRQLAVGPVALVSLLVSNALSGIVDPSE--ELYTELAILLALMVGIFES 177          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SULH2_SCHPO (Probable sulfate permease C869.05c OS=Schizosaccharomyces pombe GN=SPAC869.05c PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.688e-19
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 1
Query:  322 KKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNEN---PKLYLHLAFTA 660
            K F+  L+ +FPI EW P Y+  +L  DLIAGIT+  + +PQG+SYAK+A LP   GLYSSFV   +Y    +SKD+++G VAV SL+ A  +   +  +E    P++   LA  A
Sbjct:   97 KNFLHYLKSLFPIIEWLPNYNPYWLINDLIAGITVGCVVVPQGMSYAKVATLPSEYGLYSSFVGVAIYCFFATSKDVSIGPVAVMSLITAKVIANVMAKDETYTAPQIATCLALLA 212          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SULH1_SCHPO (Probable sulfate permease C3H7.02 OS=Schizosaccharomyces pombe GN=SPBC3H7.02 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  340 LQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASL----LIASFLGQEVNYN 621
            L+ +FPI  W PRY++ +L  D IAGIT+  + +PQG+SYAK+A LP   GLYSSFV   +Y I  +SKD+++G VAV SL    +IA+   ++ NY+
Sbjct:  116 LRSLFPIMNWLPRYNWNWLVYDFIAGITVGCVVVPQGMSYAKVATLPAQYGLYSSFVGVAIYCIFATSKDVSIGPVAVMSLVTSKVIANVQAKDPNYD 213          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUL1_YEAST (Sulfate permease 1 OS=Saccharomyces cerevisiae GN=SUL1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18
Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 1
Query:  304 KNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFC 672
            KN   +K     L  +FPI +W P Y+F +  ADL+AGIT+  + +PQ +SYA++A+L P  GLYSSF+   +Y++  +SKD+ +G VAV SL  A  + + +      +  +     AT  C
Sbjct:   91 KNNLTAKSAGSYLVSLFPIIKWFPHYNFTWGYADLVAGITVGCVLVPQSMSYAQIASLSPEYGLYSSFIGAFIYSLFATSKDVCIGPVAVMSLQTAKVIAEVLKKYPEDQTEVTAPIIATTLC 213          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUL2_YEAST (Sulfate permease 2 OS=Saccharomyces cerevisiae GN=SUL2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 1
Query:  340 LQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFL 600
            L+ VFPI  W P Y+F +  ADLIAGITI  + +PQ +SYA++A LP   GLYSSF+    Y+   +SKD+ +G VAV SL  A  +
Sbjct:  119 LKSVFPIINWLPHYNFSWFTADLIAGITIGCVLVPQSMSYAQVATLPAQYGLYSSFIGAYSYSFFATSKDVCIGPVAVMSLQTAKVI 205          
The following BLAST results are available for this feature:
BLAST of CN189611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SUT21_ARATH1.460e-2943.87Sulfate transporter 2.1 OS=Arabidopsis thaliana GN... [more]
SUT3_STYHA1.309e-2440.76Low affinity sulfate transporter 3 OS=Stylosanthes... [more]
SUT22_ARATH1.309e-2444.96Sulfate transporter 2.2 OS=Arabidopsis thaliana GN... [more]
NO70_SOYBN9.379e-2338.41Early nodulin-70 OS=Glycine max PE=2 SV=1[more]
SUT41_ARATH3.564e-2252.94Sulfate transporter 4.1, chloroplastic OS=Arabidop... [more]
SUT42_ARATH3.940e-2137.79Probable sulfate transporter 4.2 OS=Arabidopsis th... [more]
SULH2_SCHPO3.688e-1943.97Probable sulfate permease C869.05c OS=Schizosaccha... [more]
SULH1_SCHPO4.817e-1947.96Probable sulfate permease C3H7.02 OS=Schizosacchar... [more]
SUL1_YEAST6.955e-1837.40Sulfate permease 1 OS=Saccharomyces cerevisiae GN=... [more]
SUL2_YEAST2.024e-1749.43Sulfate permease 2 OS=Saccharomyces cerevisiae GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189611 ID=CN189611; Name=CN189611; organism=Citrus sinensis; type=EST; length=692bp
GAGGCTCCGAATTCAGCGTAGCCACTCCTATAACACTGCGCATATCTTTT
GCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAACGCAGCCGCTGC
ATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTACATG
GATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATGTGGA
GAATGCACATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAATTCAC
TGAAGTATAATCTTAAAGAGACGTTCTTCCCTGATGATCCGCTCAGGCTA
TTCAAGAACAAGCCGGCATCTAAGAAGTTCATATTAGGCCTTCAGTATGT
GTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTCAGTTCTTGAAAG
CTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCAGGGG
ATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTATATTC
AAGCTTTGTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAAGATT
TGGCAGTTGGAACGGTGGCTGTCGCCTCACTTCTCATAGCTTCATTCTTG
GGGCAAGAAGTTAATTATAATGAGAACCCTAAGCTATATCTTCATCTTGC
TTTCACTGCAACATTTTTTTGCTGGTGTTTTTCAAGCTTCCT
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