CN189611

Overview
NameCN189611
Unique NameCN189611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A9_XENTR (Solute carrier family 26 member 9 OS=Xenopus tropicalis GN=slc26a9 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  322 KKFILGLQYVFPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS 594
            K FI  L   FPI  W P+Y+ +  L  D + GI+  ++ IPQG+++A LANLPP+ GLYSSF P +VY  MG    +  GT AV S+++ +
Sbjct:   49 KNFIFRL---FPILSWLPKYNIKGNLLNDALGGISAGTIQIPQGMAFALLANLPPVNGLYSSFFPLVVYFFMGGIPQMVPGTFAVISIIVGN 137          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S2610_MOUSE (Solute carrier family 26 member 10 OS=Mus musculus GN=Slc26a10 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14
Identity = 34/87 (39.08%), Postives = 60/87 (68.97%), Query Frame = 1
Query:  355 PIFEWAPRYSFQ-FLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV 612
            P   W P+Y ++ +L  D +AG+T+  + +PQG+++A L ++PP+ GLY+SF P L+Y+++G+ + L+ GT AV SL+  S + + V
Sbjct:   83 PPLRWLPQYRWRAWLLGDAVAGVTVGVVHVPQGMAFALLTSVPPVFGLYTSFFPVLIYSLLGTGRHLSTGTFAVLSLMTGSVVERVV 169          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A9_MOUSE (Solute carrier family 26 member 9 OS=Mus musculus GN=Slc26a9 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  322 KKFILGLQYVFPIFEWAPRYSFQ-FLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS 594
            K F+ GL    P+  W P+Y  + ++  DL+ G++   + +PQG+++A LANLP + GLYSSF P L Y  +G    +  GT AV S+L+ +
Sbjct:   49 KAFVFGL---LPVLSWLPKYKIKDYIIPDLLGGLSGGCIQVPQGMAFALLANLPAVNGLYSSFFPLLTYFFLGGIHQMVPGTFAVISILVGN 137          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A3_HUMAN (Chloride anion exchanger OS=Homo sapiens GN=SLC26A3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 32/91 (35.16%), Postives = 61/91 (67.03%), Query Frame = 1
Query:  319 SKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLI 588
            +K+ +L L   FPI  W P Y   ++L +D+++GI+   +A+ QG+++A L ++PP+ GLY+SF P ++Y   G+S+ ++VG   + S+++
Sbjct:   50 AKRIVLSL---FPIASWLPAYRLKEWLLSDIVSGISTGIVAVLQGLAFALLVDIPPVYGLYASFFPAIIYLFFGTSRHISVGPFPILSMMV 137          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A9_HUMAN (Solute carrier family 26 member 9 OS=Homo sapiens GN=SLC26A9 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  322 KKFILGLQYVFPIFEWAPRYSFQ-FLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS 594
            K  + GL    P+  W P+Y  + ++  DL+ G++  S+ +PQG+++A LANLP + GLYSSF P L Y  +G    +  GT AV S+L+ +
Sbjct:   49 KAVVFGL---LPVLSWLPKYKIKDYIIPDLLGGLSGGSIQVPQGMAFALLANLPAVNGLYSSFFPLLTYFFLGGVHQMVPGTFAVISILVGN 137          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A1_RAT (Sulfate anion transporter 1 OS=Rattus norvegicus GN=Slc26a1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13
Identity = 40/131 (30.53%), Postives = 72/131 (54.96%), Query Frame = 1
Query:  223 PPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV 612
            P  Q    +LK  LK++           + P ++  + GL   FP+  W P+Y   ++L  D+++G+ I  + +PQ I+Y+ LA L PI  LY+SF   L+Y +MG+S+ + VG  ++  L++   + +E+
Sbjct:   22 PVSQGLLETLKARLKKS--------CTCSMPCAQALVQGL---FPVIRWLPQYRLKEYLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDREL 141          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A7_MOUSE (Anion exchange transporter OS=Mus musculus GN=Slc26a7 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  355 PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS 594
            PI EWAP+Y+  + L  D ++GI +A   + QG+S+A L+++ P+ GLY S  P ++YAI G  + +A GT A+ SL+ A+
Sbjct:   33 PILEWAPQYNLKENLLPDTVSGIMLAVQQVAQGLSFAMLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISAN 113          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A3_RAT (Chloride anion exchanger OS=Rattus norvegicus GN=Slc26a3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 34/91 (37.36%), Postives = 59/91 (64.84%), Query Frame = 1
Query:  319 SKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLI 588
            +KK  L L   FPI  W P Y   ++L +D+++GI+   +A+ QG+++A L N+PP  GLY++F P + Y  +G+S+ ++VG   V S+++
Sbjct:   50 AKKIALSL---FPIASWLPAYKIKEWLLSDIVSGISTGLVAVLQGLAFALLVNIPPAYGLYAAFFPVITYFFLGTSRHISVGPFPVLSMMV 137          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A3_MOUSE (Chloride anion exchanger OS=Mus musculus GN=Slc26a3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 34/91 (37.36%), Postives = 59/91 (64.84%), Query Frame = 1
Query:  319 SKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLI 588
            +KK  L L   FPI  W P Y   ++L +D+++GI+   +A+ QG+++A L N+PP  GLY++F P + Y  +G+S+ ++VG   V S+++
Sbjct:   50 AKKIALSL---FPIASWLPAYKIKEWLLSDIVSGISTGLVAVLQGLAFALLVNIPPAYGLYAAFFPVITYFFLGTSRHISVGPFPVLSMMV 137          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A1_MOUSE (Sulfate anion transporter 1 OS=Mus musculus GN=Slc26a1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 40/131 (30.53%), Postives = 71/131 (54.20%), Query Frame = 1
Query:  223 PPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV 612
            P  Q    +LK  LK++           + P ++  + GL   FP   W P+Y   ++L  D+++G+ I  + +PQ I+Y+ LA L PI  LY+SF   L+Y +MG+S+ + VG  ++  L++   + +E+
Sbjct:   22 PVSQGLLETLKARLKKS--------CTCSMPCAQALVQGL---FPAIHWLPQYRLKEYLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDREL 141          
The following BLAST results are available for this feature:
BLAST of CN189611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
S26A9_XENTR2.094e-1444.57Solute carrier family 26 member 9 OS=Xenopus tropi... [more]
S2610_MOUSE2.735e-1439.08Solute carrier family 26 member 10 OS=Mus musculus... [more]
S26A9_MOUSE3.950e-1339.13Solute carrier family 26 member 9 OS=Mus musculus ... [more]
S26A3_HUMAN5.158e-1335.16Chloride anion exchanger OS=Homo sapiens GN=SLC26A... [more]
S26A9_HUMAN6.737e-1339.13Solute carrier family 26 member 9 OS=Homo sapiens ... [more]
S26A1_RAT8.799e-1330.53Sulfate anion transporter 1 OS=Rattus norvegicus G... [more]
S26A7_MOUSE1.149e-1241.98Anion exchange transporter OS=Mus musculus GN=Slc2... [more]
S26A3_RAT1.501e-1237.36Chloride anion exchanger OS=Rattus norvegicus GN=S... [more]
S26A3_MOUSE1.501e-1237.36Chloride anion exchanger OS=Mus musculus GN=Slc26a... [more]
S26A1_MOUSE2.560e-1230.53Sulfate anion transporter 1 OS=Mus musculus GN=Slc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189611 ID=CN189611; Name=CN189611; organism=Citrus sinensis; type=EST; length=692bp
GAGGCTCCGAATTCAGCGTAGCCACTCCTATAACACTGCGCATATCTTTT
GCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAACGCAGCCGCTGC
ATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTACATG
GATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATGTGGA
GAATGCACATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAATTCAC
TGAAGTATAATCTTAAAGAGACGTTCTTCCCTGATGATCCGCTCAGGCTA
TTCAAGAACAAGCCGGCATCTAAGAAGTTCATATTAGGCCTTCAGTATGT
GTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTCAGTTCTTGAAAG
CTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCAGGGG
ATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTATATTC
AAGCTTTGTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAAGATT
TGGCAGTTGGAACGGTGGCTGTCGCCTCACTTCTCATAGCTTCATTCTTG
GGGCAAGAAGTTAATTATAATGAGAACCCTAAGCTATATCTTCATCTTGC
TTTCACTGCAACATTTTTTTGCTGGTGTTTTTCAAGCTTCCT
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