CN189611

Overview
NameCN189611
Unique NameCN189611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SULP3_CAEEL (Sulfate permease family protein 3 OS=Caenorhabditis elegans GN=sulp-3 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 1
Query:  253 KYNLKETFFPDDPLRLFKNKPASK--------KFILGLQYVFPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLL 585
            K +L++ F    PL     + A K        K I  L    PI  W P+Y +      DL  G+T+A  ++PQGI+ A +  +PP+ GLY++  P  +Y   G+SK  A+G  AV SL+
Sbjct:    4 KMSLRQLFSDRPPLNAVLQEKAQKLRYACSPSKCIHSLLSFLPIITWLPKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVPPVYGLYTAIFPSFLYIFFGTSKHNALGGFAVLSLM 123          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A4_HUMAN (Pendrin OS=Homo sapiens GN=SLC26A4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 1
Query:  319 SKKFILG-LQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS 594
            S+K   G L+ + PI EW P+Y   ++L +D+I+G++   +A  QG++YA LA +P   GLYS+F P L Y I G+S+ ++VG   V SL++ S
Sbjct:   57 SRKRAFGVLKTLVPILEWLPKYRVKEWLLSDVISGVSTGLVATLQGMAYALLAAVPVGYGLYSAFFPILTYFIFGTSRHISVGPFPVVSLMVGS 150          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A7_PONAB (Anion exchange transporter OS=Pongo abelii GN=SLC26A7 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12
Identity = 34/90 (37.78%), Postives = 57/90 (63.33%), Query Frame = 1
Query:  355 PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYN 621
            PI +WAP Y+  + L  D ++GI +A   + QG+++A L+++ P+ GLY S  P ++YAI G  + +A GT A+ SL+ A+ + + V  N
Sbjct:   33 PILDWAPHYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAIFGMGRHVATGTFALTSLISANAVERIVPQN 122          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A7_HUMAN (Anion exchange transporter OS=Homo sapiens GN=SLC26A7 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  355 PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYN 621
            PI +WAP Y+  + L  D ++GI +A   + QG+++A L+++ P+ GLY S  P ++YAI G    +A GT A+ SL+ A+ + + V  N
Sbjct:   33 PILDWAPHYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAIFGMGHHVATGTFALTSLISANAVERIVPQN 122          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A4_RAT (Pendrin OS=Rattus norvegicus GN=Slc26a4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 37/101 (36.63%), Postives = 63/101 (62.38%), Query Frame = 1
Query:  298 LFKNKPASKKFILG-LQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS 594
            L ++   S+K   G L+ + PI +W P+Y   ++L +D+I+G++   +   QG++YA LA +P   GLYS+F P L Y + G+S+ ++VG   V SL++ S
Sbjct:   50 LARSCSCSRKRAFGALKALLPILDWLPKYRVKEWLLSDIISGVSTGLVGTLQGMAYALLAAVPVQYGLYSAFFPILTYFVFGTSRHISVGPFPVVSLMVGS 150          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A2_SHEEP (Sulfate transporter OS=Ovis aries GN=SLC26A2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 30/87 (34.48%), Postives = 55/87 (63.22%), Query Frame = 1
Query:  355 PIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV 612
            P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   L+Y I+G+S+ ++VG   +  L+I   + +E+
Sbjct:   95 PVLQWLPKYDLKKNILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASLIYFILGTSRHISVGIFGILCLMIGEVVDREL 181          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A2_HUMAN (Sulfate transporter OS=Homo sapiens GN=SLC26A2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 32/99 (32.32%), Postives = 60/99 (60.61%), Query Frame = 1
Query:  319 SKKFILGLQYVFPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV 612
            +K  ILG     P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   P+ GLY+SF   ++Y ++G+S+ ++VG   V  L+I   + +E+
Sbjct:   85 AKNMILGF---LPVLQWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPVYGLYTSFFASIIYFLLGTSRHISVGIFGVLCLMIGETVDREL 180          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A2_HORSE (Sulfate transporter OS=Equus caballus GN=SLC26A2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 33/99 (33.33%), Postives = 59/99 (59.60%), Query Frame = 1
Query:  319 SKKFILGLQYVFPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV 612
            +K  I G     P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   L+Y ++G+S+ ++VG   V  L+I   + +E+
Sbjct:   87 AKNMIFGF---LPVLQWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASLIYFLLGTSRHISVGIFGVLCLMIGEVVDREL 182          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A4_MOUSE (Pendrin OS=Mus musculus GN=Slc26a4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 36/101 (35.64%), Postives = 63/101 (62.38%), Query Frame = 1
Query:  298 LFKNKPASKKFILGL-QYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS 594
            L ++   S+K   G+ + + PI +W P+Y   ++L +D+I+G++   +   QG++YA LA +P   GLYS+F P L Y + G+S+ ++VG   V SL++ S
Sbjct:   50 LARSCSCSRKRAFGVVKTLLPILDWLPKYRVKEWLLSDIISGVSTGLVGTLQGMAYALLAAVPVQFGLYSAFFPILTYFVFGTSRHISVGPFPVVSLMVGS 150          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: S26A2_RAT (Sulfate transporter OS=Rattus norvegicus GN=Slc26a2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 29/89 (32.58%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  352 FPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVN 615
            FP+  W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   ++Y + G+S+ ++VG   +  L+I   + +E++
Sbjct:   93 FPVLRWLPKYDLKKNILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLFGTSRHISVGIFGILCLMIGEVVDRELH 181          
The following BLAST results are available for this feature:
BLAST of CN189611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SULP3_CAEEL4.367e-1234.17Sulfate permease family protein 3 OS=Caenorhabditi... [more]
S26A4_HUMAN4.367e-1241.49Pendrin OS=Homo sapiens GN=SLC26A4 PE=1 SV=1[more]
S26A7_PONAB5.703e-1237.78Anion exchange transporter OS=Pongo abelii GN=SLC2... [more]
S26A7_HUMAN1.271e-1137.78Anion exchange transporter OS=Homo sapiens GN=SLC2... [more]
S26A4_RAT1.271e-1136.63Pendrin OS=Rattus norvegicus GN=Slc26a4 PE=2 SV=1[more]
S26A2_SHEEP1.659e-1134.48Sulfate transporter OS=Ovis aries GN=SLC26A2 PE=3 ... [more]
S26A2_HUMAN1.659e-1132.32Sulfate transporter OS=Homo sapiens GN=SLC26A2 PE=... [more]
S26A2_HORSE1.659e-1133.33Sulfate transporter OS=Equus caballus GN=SLC26A2 P... [more]
S26A4_MOUSE2.167e-1135.64Pendrin OS=Mus musculus GN=Slc26a4 PE=2 SV=1[more]
S26A2_RAT2.167e-1132.58Sulfate transporter OS=Rattus norvegicus GN=Slc26a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189611 ID=CN189611; Name=CN189611; organism=Citrus sinensis; type=EST; length=692bp
GAGGCTCCGAATTCAGCGTAGCCACTCCTATAACACTGCGCATATCTTTT
GCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAACGCAGCCGCTGC
ATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTACATG
GATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATGTGGA
GAATGCACATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAATTCAC
TGAAGTATAATCTTAAAGAGACGTTCTTCCCTGATGATCCGCTCAGGCTA
TTCAAGAACAAGCCGGCATCTAAGAAGTTCATATTAGGCCTTCAGTATGT
GTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTCAGTTCTTGAAAG
CTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCAGGGG
ATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTATATTC
AAGCTTTGTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAAGATT
TGGCAGTTGGAACGGTGGCTGTCGCCTCACTTCTCATAGCTTCATTCTTG
GGGCAAGAAGTTAATTATAATGAGAACCCTAAGCTATATCTTCATCTTGC
TTTCACTGCAACATTTTTTTGCTGGTGTTTTTCAAGCTTCCT
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