CN189604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_DROME (Homogentisate 1,2-dioxygenase OS=Drosophila melanogaster GN=hgo PE=1 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 1.912e-61 Identity = 85/137 (62.04%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSP---TDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P QLRWKP D+P +F++GL+T+CGAG RHG AIH+Y+ N SMDN AF N+DGDFL+VPQ+G L I TE G++ V+P EI V+PQG RFAV++ D PSRGYI E++ HF LPDLGPIGANGLA PRDF Sbjct: 93 PNQLRWKPFDLPPKDGKNVNFVEGLHTVCGAGDPRSRHGLAIHIYSCNGSMDNSAFYNSDGDFLIVPQQGVLDITTEFGRMSVAPNEICVIPQGIRFAVNV-DSPSRGYILEVYDDHFVLPDLGPIGANGLANPRDF 228 HSP 2 Score: 79.337 bits (194), Expect = 1.912e-61 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 87 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 S+ Y SGFG+ FSSE +LP GQNSP VCP+ LYAEQ+SG++FT+PR N R+WLYR PS Sbjct: 2 SEYKYLSGFGSHFSSEDERYPNSLPVGQNSPQVCPYKLYAEQLSGSAFTAPRTENMRTWLYRKLPS 67
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RALSO (Homogentisate 1,2-dioxygenase OS=Ralstonia solanacearum GN=hmgA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 4.237e-61 Identity = 85/163 (52.15%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H PF+P A + S+F + +P QLRW P+ P + TDFIDG+ T G G + G IH+Y AN SM F NADG+ L+VPQ+GRL + TE G L+V P EIAV+P+G RF V LPDG +RGY+ E FG F+LPDLG IG+NGLA PRDFL Sbjct: 82 AVHLPFEPI--AQDRFHSDFHAVPA--SPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANASMTGRFFYNADGELLIVPQQGRLRLLTELGVLDVEPLEIAVIPRGVRFRVELPDGEARGYLCENFGAIFRLPDLGVIGSNGLANPRDFL 240 HSP 2 Score: 94.3597 bits (233), Expect = 4.237e-61 Identity = 40/60 (66.67%), Postives = 52/60 (86.67%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y+SGFGN F++EA+ GALP GQNSP P+GLYAEQ+SGT+FT+PR N+R+WLYRI+P+ Sbjct: 22 YQSGFGNEFATEALPGALPHGQNSPQQAPYGLYAEQLSGTAFTAPRAHNRRAWLYRIRPA 81
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_MYXXD (Homogentisate 1,2-dioxygenase OS=Myxococcus xanthus (strain DK 1622) GN=hmgA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.238e-61 Identity = 85/164 (51.83%), Postives = 109/164 (66.46%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVS-EFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H F+P A G L S FD+ + +P +LRW P P PTDF+DGL T G G + G +IH+Y AN+SM + F +ADG+ L+VPQ GRL + TE G L+V+PGEIAV+P+G RF LP+G + GY+ E G F+LPDLGPIGANGLA PRDFL Sbjct: 74 ANHPAFQPL--AQGLLRSGPFDEVPA--SPNRLRWSPQPPPAQPTDFVDGLVTYAGNGDAASGAGISIHLYAANRSMVDRVFFDADGELLIVPQAGRLRLVTELGVLDVAPGEIAVVPRGVRFRAELPEGQAAGYVCENHGAFFRLPDLGPIGANGLANPRDFL 233 HSP 2 Score: 94.7449 bits (234), Expect = 4.238e-61 Identity = 41/60 (68.33%), Postives = 52/60 (86.67%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGFGN F++EA+ GALP GQNSP PFGLYAEQ+SG++FT+PR+ N+RSWLYR++PS Sbjct: 14 YLSGFGNEFATEAVPGALPEGQNSPQRAPFGLYAEQLSGSAFTAPRRENRRSWLYRLRPS 73
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BORPD (Homogentisate 1,2-dioxygenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=hmgA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 4.239e-61 Identity = 83/160 (51.88%), Postives = 106/160 (66.25%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 H PF+P A + +S+F + TP QLRW P+ +PD+PTDFI+G+ T G G G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +EV P EIAV+P+G R V LPDG +RGY+ E FG LP+LGPIG+N LA RDF Sbjct: 67 HRPFEPFDGA-ARWLSDFGAAP--VTPNQLRWSPLPLPDAPTDFIEGVQTWGGNGGPGEHGGVGIHLYAANRSMQGRYFYNADGELLIVPQQGRLRLATELGIIEVEPLEIAVIPRGVRLRVDLPDGQARGYMLENFGAALHLPELGPIGSNCLANARDF 223 HSP 2 Score: 96.6709 bits (239), Expect = 4.239e-61 Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKP-SQH 284 L Y+SGFGN +++EA+ GALP G+NSP CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P +QH Sbjct: 3 LQYQSGFGNDWATEALPGALPAGRNSPQRCPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPAAQH 67
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BORPE (Homogentisate 1,2-dioxygenase OS=Bordetella pertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 4.239e-61 Identity = 81/162 (50.00%), Postives = 108/162 (66.67%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLV 769 H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R V L D +RGY+ E FGT +LP+LGPIG+N LA RDF + Sbjct: 67 HLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLDDVARGYVLENFGTAMRLPELGPIGSNCLANARDFQI 225 HSP 2 Score: 97.8265 bits (242), Expect = 4.239e-61 Identity = 42/66 (63.64%), Postives = 58/66 (87.88%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHM 287 L+Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P QH+ Sbjct: 3 LHYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHL 68
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RALEH (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hmgA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 7.205e-61 Identity = 84/161 (52.17%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 H PF + +S FD+ +P Q+RW P +P PTDF+DG+ T+ G G G IH+Y AN+SM + F NADG+ L+VPQ+GRL + TE G+LEV P EI V+P+G RF V LPDG +RGYI E +G FQLPDLG IG+NGLA PRDFL Sbjct: 75 HTPFTQI--EQSRFLSRFDQVPP--SPNQMRWSPPAMPSVPTDFVDGIVTMAGNGGPEAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRLLMVTELGRLEVEPQEIVVIPRGVRFRVELPDGEARGYICENYGALFQLPDLGVIGSNGLANPRDFL 231 HSP 2 Score: 89.3521 bits (220), Expect = 7.205e-61 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ Sbjct: 13 YMSGFANEFATEALPGALPVGRNSPQCAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRPA 72
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BORPA (Homogentisate 1,2-dioxygenase OS=Bordetella parapertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 9.395e-61 Identity = 81/162 (50.00%), Postives = 108/162 (66.67%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLV 769 H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R V L D +RGY+ E FGT +LP+LGPIG+N LA RDF + Sbjct: 67 HLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLDDVARGYMLENFGTAMRLPELGPIGSNCLANARDFQI 225 HSP 2 Score: 97.4413 bits (241), Expect = 9.395e-61 Identity = 42/66 (63.64%), Postives = 57/66 (86.36%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHM 287 L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P QH+ Sbjct: 3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHL 68
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BORBR (Homogentisate 1,2-dioxygenase OS=Bordetella bronchiseptica GN=hmgA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 9.395e-61 Identity = 81/162 (50.00%), Postives = 108/162 (66.67%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLV 769 H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R V L D +RGY+ E FGT +LP+LGPIG+N LA RDF + Sbjct: 67 HLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLDDVARGYMLENFGTAMRLPELGPIGSNCLANARDFQI 225 HSP 2 Score: 97.4413 bits (241), Expect = 9.395e-61 Identity = 42/66 (63.64%), Postives = 57/66 (86.36%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHM 287 L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P QH+ Sbjct: 3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHL 68
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_MOUSE (Homogentisate 1,2-dioxygenase OS=Mus musculus GN=Hgd PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.225e-60 Identity = 83/166 (50.00%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 281 THEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIP---DSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLV 769 +H+PF+ H + +D+ P QLRWKP +IP + DF+ GLYT+CGAG +G A+H++ N SM+N F N+DGDFL+VPQKG+L I TE GK+ + P EI V+ +G RF+V + + +RGYI E++G HF+LPDLGPIGANGLA PRDFL+ Sbjct: 69 SHKPFESIDQGH--VTHNWDEVGP--DPNQLRWKPFEIPKASEKKVDFVSGLYTLCGAGDIKSNNGLAVHIFLCNSSMENRCFYNSDGDFLIVPQKGKLLIYTEFGKMSLQPNEICVIQRGMRFSVDVFE-ETRGYILEVYGVHFELPDLGPIGANGLANPRDFLI 229 HSP 2 Score: 86.6557 bits (213), Expect = 1.225e-60 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 87 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 ++L Y SGFGN +SE G+LP+GQN+P VCP+ LYAEQ+SG++FT PR N+RSWLYRI PS Sbjct: 2 AELKYISGFGNECASEDPRCPGSLPKGQNNPQVCPYNLYAEQLSGSAFTCPRNTNKRSWLYRILPS 67
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_CAEEL (Homogentisate 1,2-dioxygenase OS=Caenorhabditis elegans GN=hgo-1 PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.597e-60 Identity = 86/161 (53.42%), Postives = 107/161 (66.46%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSP-TDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 H PF+ + F S+ P Q RW P +P F+D LYT+CG G R G AIH ++ N SM++ A N+DGDFL+VPQ+G L I TE G+L V+P EIAV+PQG RF+V++ GPSRGYI E++GTHFQLPDLGPIGANGLA PRDF Sbjct: 73 HRPFEAMKENDQHWTNNF--SSIPPNPNQYRWNPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGDFLIVPQQGALEITTEFGRLLVNPQEIAVIPQGIRFSVAV-RGPSRGYILEVYGTHFQLPDLGPIGANGLANPRDF 230 HSP 2 Score: 85.5001 bits (210), Expect = 1.597e-60 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 81 DFSDLNYESGFGNSF--SSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 +F +L Y +GFGN S + ALP GQNSP C GLYAEQ+SGT+FT+PR NQRSWLYRI+PS Sbjct: 3 EFDELKYLTGFGNEHATSDPRVPDALPVGQNSPQKCSHGLYAEQLSGTAFTAPRSQNQRSWLYRIRPS 70 The following BLAST results are available for this feature:
BLAST of CN189604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189604 ID=CN189604; Name=CN189604; organism=Citrus sinensis; type=EST; length=769bpback to top |