CN189604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RALEJ (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain JMP134) GN=hmgA PE=3 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.082e-60 Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = 2 Query: 278 STHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + H+PF + + +S FD+ +P Q+RW P +P +PTDFIDG+ T+ G G G IH+Y AN+SM + F NADG+ L+VPQ+GR+ TE G+L+V P EI V+P+G RF V LPDG +RGYI E +G F+LPDLG IG+NGLA PRDF+ Sbjct: 73 AVHKPFT--LVEQSRFLSRFDEVPP--SPNQMRWSPPAMPTTPTDFIDGIVTMAGNGGPDAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRVRFVTEMGRLDVEPQEIVVIPRGVRFRVELPDGEARGYICENYGALFKLPDLGVIGSNGLANPRDFM 231 HSP 2 Score: 89.7373 bits (221), Expect = 2.082e-60 Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKP 275 Y SGF N F++EA+ GALP GQNSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P Sbjct: 13 YMSGFANEFATEALPGALPVGQNSPQRAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRP 71
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BORA1 (Homogentisate 1,2-dioxygenase OS=Bordetella avium (strain 197N) GN=hmgA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.083e-60 Identity = 82/160 (51.25%), Postives = 102/160 (63.75%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 H PF+P A L D TP QLRW P+ +P +PTDFIDG++T G G + G IH+Y AN+SM F NAD + L+VPQ GRL +ATE G L++ P EIAVLP+G RF V L D +RGY+ E FGT + P+LGPIG+NGLA RDF Sbjct: 67 HRPFEPYAGAPHWLA---DFGTGPVTPNQLRWSPLPLPATPTDFIDGVHTWGGNGGPDEQSGVGIHLYAANQSMKGRFFYNADAEMLLVPQLGRLRLATEMGLLDLEPLEIAVLPRGVRFRVELLDAEARGYLLENFGTALRPPELGPIGSNGLANARDF 223 HSP 2 Score: 98.9821 bits (245), Expect = 2.083e-60 Identity = 42/61 (68.85%), Postives = 55/61 (90.16%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKP 275 LNY+SGFGN+ ++EA+ GALP+G+NSP CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P Sbjct: 3 LNYQSGFGNACATEALPGALPQGRNSPQQCPYGLYAEQLSGTAFTAPRSENRRSWLYRIRP 63
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_HUMAN (Homogentisate 1,2-dioxygenase OS=Homo sapiens GN=HGD PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.023e-59 Identity = 83/166 (50.00%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 281 THEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSP---TDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLV 769 +H+PF+ H + +D+ + P QLRWKP +IP + DF+ GL+T+CGAG +G AIH++ N SM+N F N+DGDFL+VPQKG L I TE GK+ V P EI V+ +G RF++ + + +RGYI E++G HF+LPDLGPIGANGLA PRDFL+ Sbjct: 69 SHKPFESIDEGH--VTHNWDEVDP--DPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE-ETRGYILEVYGVHFELPDLGPIGANGLANPRDFLI 229 HSP 2 Score: 87.0409 bits (214), Expect = 1.023e-59 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 87 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 ++L Y SGFGN SSE G+LP GQN+P VCP+ LYAEQ+SG++FT PR N+RSWLYRI PS Sbjct: 2 AELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRILPS 67
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_CAUSK (Homogentisate 1,2-dioxygenase OS=Caulobacter sp. (strain K31) GN=hmgA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.334e-59 Identity = 72/136 (52.94%), Postives = 97/136 (71.32%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P++IP++P DF+DGL T+ G G + G A H+Y AN+SM + F NADG+ L+VPQ G L TE G ++ +PGE+ V+P+G RF V L +GP RGY+ E +G F+LP+LGPIG+NGLA RDFL Sbjct: 89 TPNRLRWDPLEIPEAPLDFVDGLVTLAGNGDVATQAGMAAHLYLANRSMIDRVFQNADGELLIVPQLGALRFVTELGVIDAAPGEVVVIPRGVRFRVEL-EGPVRGYVCENYGPMFRLPELGPIGSNGLANSRDFL 223 HSP 2 Score: 97.0561 bits (240), Expect = 1.334e-59 Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 3 Query: 90 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 DL Y+SGF N FS+EA+ GALP GQNSP P+GLYAEQ+SGT+FT+PR N+RSWLYR++PS Sbjct: 2 DLQYQSGFANHFSTEAVPGALPVGQNSPQAPPYGLYAEQLSGTAFTAPRHENRRSWLYRLRPS 64
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_CAUCR (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus GN=hmgA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.739e-59 Identity = 82/160 (51.25%), Postives = 106/160 (66.25%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 HE ++P A KLVS F TP +LRW P++IP +PTDF+DGL ++ G + G A H+Y N SM N F NADG+ L+VPQ G L + TE G L+ PG IAV+P+G RF V + +GP+RGY+ E +G F+LP+LGPIGANGLA PRDF Sbjct: 67 HEAYQPY--AQDKLVSAFPGP---ATPNRLRWSPLEIPAAPTDFVDGLVSLAGNADAATLGGIAAHVYLVNVSMKNRVFYNADGEMLIVPQMGELTLVTEMGVLKAGPGHIAVIPRGVRFRVEV-EGPARGYVCENYGAAFRLPELGPIGANGLANPRDF 220 HSP 2 Score: 88.9669 bits (219), Expect = 1.739e-59 Identity = 39/63 (61.90%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 90 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 DL Y++GFG+ F +EA GALP G+NSP PFGLYAEQ+SG++FT+PR N+R+WLYR++PS Sbjct: 2 DLRYQTGFGSYFETEAHPGALPVGRNSPQKVPFGLYAEQLSGSAFTAPRHENRRTWLYRLRPS 64
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_CAUCN (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=hmgA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.739e-59 Identity = 82/160 (51.25%), Postives = 106/160 (66.25%), Query Frame = 2 Query: 284 HEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 HE ++P A KLVS F TP +LRW P++IP +PTDF+DGL ++ G + G A H+Y N SM N F NADG+ L+VPQ G L + TE G L+ PG IAV+P+G RF V + +GP+RGY+ E +G F+LP+LGPIGANGLA PRDF Sbjct: 67 HEAYQPY--AQDKLVSAFPGP---ATPNRLRWSPLEIPAAPTDFVDGLVSLAGNADAATLGGIAAHVYLVNVSMKNRVFYNADGEMLIVPQMGELTLVTEMGVLKAGPGHIAVIPRGVRFRVEV-EGPARGYVCENYGAAFRLPELGPIGANGLANPRDF 220 HSP 2 Score: 88.9669 bits (219), Expect = 1.739e-59 Identity = 39/63 (61.90%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 90 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 DL Y++GFG+ F +EA GALP G+NSP PFGLYAEQ+SG++FT+PR N+R+WLYR++PS Sbjct: 2 DLRYQTGFGSYFETEAHPGALPVGRNSPQKVPFGLYAEQLSGSAFTAPRHENRRTWLYRLRPS 64
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_XANCP (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris GN=hmgA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 6.550e-59 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P QLRW P+ +P +PTDFIDGLYT+ G GS +G A+H+Y AN SM + F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L DG +RGY+ E FG LPDLGPIG+NGLA PRDF Sbjct: 112 PDQLRWSPLPLPQTPTDFIDGLYTMAGNGSPEAMNGVAVHLYAANASMQDRFFYNADGELLLVPQLGRLRVHTELGMLELEPQQIGVIPRGVRFRVELRDGTARGYVCENFGGLLHLPDLGPIGSNGLANPRDF 245 HSP 2 Score: 84.3445 bits (207), Expect = 6.550e-59 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 72 DGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNRLSL 302 D +D Y +GFGN F+SEA+ LP GQNSP GLYAEQ+SGT+FT+PR N+RSWLYR++P+ SL Sbjct: 19 DAPMHNDQRYMTGFGNEFASEAVADTLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRMRPAAVHGTFSL 95
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_XANC8 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hmgA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 6.550e-59 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P QLRW P+ +P +PTDFIDGLYT+ G GS +G A+H+Y AN SM + F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L DG +RGY+ E FG LPDLGPIG+NGLA PRDF Sbjct: 112 PDQLRWSPLPLPQTPTDFIDGLYTMAGNGSPEAMNGVAVHLYAANASMQDRFFYNADGELLLVPQLGRLRVHTELGMLELEPQQIGVIPRGVRFRVELRDGTARGYVCENFGGLLHLPDLGPIGSNGLANPRDF 245 HSP 2 Score: 84.3445 bits (207), Expect = 6.550e-59 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 72 DGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNRLSL 302 D +D Y +GFGN F+SEA+ LP GQNSP GLYAEQ+SGT+FT+PR N+RSWLYR++P+ SL Sbjct: 19 DAPMHNDQRYMTGFGNEFASEAVADTLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRMRPAAVHGTFSL 95
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PONAB (Homogentisate 1,2-dioxygenase OS=Pongo abelii GN=HGD PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 6.551e-59 Identity = 82/166 (49.40%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 281 THEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIP---DSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLV 769 +H+PF+ H + +D+ + P QLRWKP +IP D + GL+T+CGAG +G AIH++ N SM+N F N+DGDFL+VPQKG L I TE GK+ V P EI V+ +G RF++ + + +RGYI E++G HF+LPDLGPIGANGLA PRDFL+ Sbjct: 69 SHKPFESIDEGH--VTHNWDEVDP--DPNQLRWKPFEIPKVSQKKVDLVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE-ETRGYILEVYGVHFELPDLGPIGANGLANPRDFLI 229 HSP 2 Score: 86.6557 bits (213), Expect = 6.551e-59 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 87 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 + L Y SGFGN SSE G+LP GQN+P VCP+ LYAEQ+SG++FT PR N+RSWLYRI PS Sbjct: 2 AQLKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRIPPS 67
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_XANOP (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hmgA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.452e-58 Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P Q+RW P+ +P +PTDF+DGLYT+ G GS G A+H+Y AN SM F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L D +RGY+ E FG +LPDLGPIGANGLA PRDF Sbjct: 91 PDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGVRFRVELLDSAARGYVCENFGGLLRLPDLGPIGANGLANPRDF 224 HSP 2 Score: 87.8113 bits (216), Expect = 1.452e-58 Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 96 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNRLSL 302 +Y +GFGN F++EA+ G+LP GQNSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ R SL Sbjct: 6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFSL 74 The following BLAST results are available for this feature:
BLAST of CN189604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189604 ID=CN189604; Name=CN189604; organism=Citrus sinensis; type=EST; length=769bpback to top |