CN189604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_XANOM (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hmgA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.452e-58 Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P Q+RW P+ +P +PTDF+DGLYT+ G GS G A+H+Y AN SM F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L D +RGY+ E FG +LPDLGPIGANGLA PRDF Sbjct: 91 PDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGVRFRVELLDSAARGYVCENFGGLLRLPDLGPIGANGLANPRDF 224 HSP 2 Score: 87.8113 bits (216), Expect = 1.452e-58 Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 96 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNRLSL 302 +Y +GFGN F++EA+ G+LP GQNSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ R SL Sbjct: 6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFSL 74
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_XANOR (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae GN=hmgA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.893e-58 Identity = 75/134 (55.97%), Postives = 94/134 (70.15%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P Q+RW P+ +P +PTDF+DGLYT+ G GS G A+H+Y AN SM F NADG+ L+VPQ GRL + TE G LE+ P ++ V+P+G RF V L D +RGY+ E FG +LPDLGPIGANGLA PRDF Sbjct: 91 PDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQVGVIPRGVRFRVELLDSAARGYVCENFGGLLRLPDLGPIGANGLANPRDF 224 HSP 2 Score: 87.8113 bits (216), Expect = 1.893e-58 Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 96 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNRLSL 302 +Y +GFGN F++EA+ G+LP GQNSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ R SL Sbjct: 6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFSL 74
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_XANC5 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hmgA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.502e-57 Identity = 74/134 (55.22%), Postives = 94/134 (70.15%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P Q+RW P+ +P + TDF+DGLYT+ G GS G A+H+Y AN SM + F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L D +RGY+ E FG +LP+LGPIGANGLA PRDF Sbjct: 93 PDQMRWSPLPLPATRTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMRDRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGLRFRVELLDSEARGYVCENFGGLLRLPELGPIGANGLANPRDF 226 HSP 2 Score: 87.8113 bits (216), Expect = 3.502e-57 Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 96 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNRLSL 302 +Y +GFGN F++EA+ G+LP GQNSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ R SL Sbjct: 8 SYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFSL 76
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_XANAC (Homogentisate 1,2-dioxygenase OS=Xanthomonas axonopodis pv. citri GN=hmgA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.950e-57 Identity = 73/134 (54.48%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P QLRW P+ +P PTDF+DGLYT+ G G G +H+Y AN SM + F +ADG+ L+VPQ+GRL + TE G L + P +I V+P+G RF V L D +RGY+ E FG +LPDLGPIGANGLA PRDF Sbjct: 112 PDQLRWSPLPLPSVPTDFVDGLYTMAGNGGPEAMSGVGVHVYAANASMQDRFFYDADGELLLVPQQGRLRVHTELGVLALEPQQIGVIPRGMRFRVELLDAAARGYVCENFGGLLRLPDLGPIGANGLANPRDF 245 HSP 2 Score: 87.8113 bits (216), Expect = 5.950e-57 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 72 DGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNRLSL 302 D +D Y +GFGN F++EA+ G+LP GQNSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+ SL Sbjct: 19 DAPMHNDQRYMTGFGNEFATEAVAGSLPIGQNSPQRVAHGLYAEQLSGTAFTAPRGQNRRSWLYRIRPAAVHGSFSL 95
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEPW (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain W619) GN=hmgA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.720e-56 Identity = 75/136 (55.15%), Postives = 97/136 (71.32%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P +P PTDFI+G + ++ G ++++Y AN+SM+ F NADG+ L+VP++GRL IATE G LEV P EIAV+P+G +F V LPDG +RGYIAE G +LPDLGPIG+NGLA PRDFL Sbjct: 92 TPNRLRWNPQPLPTEPTDFIEGWLPMVANSAADKPAGVSVYIYCANRSMER-VFFNADGELLIVPEQGRLRIATELGLLEVEPQEIAVVPRGMKFRVELPDGQARGYIAENHGAPLRLPDLGPIGSNGLANPRDFL 226 HSP 2 Score: 87.8113 bits (216), Expect = 1.720e-56 Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 3 Query: 90 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 DL Y SGFGN F+SEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI+PS Sbjct: 8 DLQYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPS 70
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEAE (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa GN=hmgA PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 8.443e-56 Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P+ +P+ PTDF+DGL + G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G +LPDLGPIG+NGLA PRDFL Sbjct: 91 TPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHGAPLRLPDLGPIGSNGLANPRDFL 225 HSP 2 Score: 88.1965 bits (217), Expect = 8.443e-56 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 81 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 D + L Y+SGFGN FSSEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI PS Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPS 69
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEAB (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hmgA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.443e-56 Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P+ +P+ PTDF+DGL + G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G +LPDLGPIG+NGLA PRDFL Sbjct: 91 TPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHGAPLRLPDLGPIGSNGLANPRDFL 225 HSP 2 Score: 88.1965 bits (217), Expect = 8.443e-56 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 81 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 D + L Y+SGFGN FSSEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI PS Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPS 69
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEA8 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain LESB58) GN=hmgA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.443e-56 Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P+ +P+ PTDF+DGL + G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G +LPDLGPIG+NGLA PRDFL Sbjct: 91 TPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHGAPLRLPDLGPIGSNGLANPRDFL 225 HSP 2 Score: 88.1965 bits (217), Expect = 8.443e-56 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 81 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 D + L Y+SGFGN FSSEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI PS Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPS 69
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEA7 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain PA7) GN=hmgA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.443e-56 Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P+ +P+ PTDF+DGL + G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G +LPDLGPIG+NGLA PRDFL Sbjct: 91 TPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHGAPLRLPDLGPIGSNGLANPRDFL 225 HSP 2 Score: 88.1965 bits (217), Expect = 8.443e-56 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 81 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 D + L Y+SGFGN FSSEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI PS Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPS 69
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEPF (Homogentisate 1,2-dioxygenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 8.444e-56 Identity = 77/136 (56.62%), Postives = 97/136 (71.32%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P+D+P PTDFIDGL ++ + G +I+ Y AN+SM+ F NADG+ L+VPQ GRL IATE G L+V+P EIAVLP+G +F V L D +RGY+AE G +LPDLGPIG+NGLA PRDFL Sbjct: 90 TPNRLRWNPLDLPTEPTDFIDGLVSMAANSGADKPAGISIYHYGANRSMER-VFFNADGELLLVPQLGRLRIATELGVLDVAPLEIAVLPRGLKFRVELLDPQARGYVAENHGAPLRLPDLGPIGSNGLANPRDFL 224 HSP 2 Score: 86.6557 bits (213), Expect = 8.444e-56 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 87 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNRLSLECLLMG 320 S L Y+SGFGN FSSEA+ GALP GQNSP P+GLY E SGT+FT R +R+W+YRI+PS H + LE L G Sbjct: 5 SALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYTELFSGTAFTMTRSEARRTWMYRIQPSANHPAFVKLERQLAG 83 The following BLAST results are available for this feature:
BLAST of CN189604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189604 ID=CN189604; Name=CN189604; organism=Citrus sinensis; type=EST; length=769bpback to top |