CN189604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_STRCO (Homogentisate 1,2-dioxygenase OS=Streptomyces coelicolor GN=hmgA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.870e-55 Identity = 69/134 (51.49%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P +LRW P+ +P TDF++GL+T+ G G + R G A+H+Y A SMD F +ADG+ L+VP++G L + TE G L PG +A++P+G RF V L D +RGY+ E +G FQLPDLGPIGANGLA RDF Sbjct: 99 PNRLRWNPLPVPGPATDFVEGLWTLGGNGDATQRTGMAVHLYHATASMDR-VFSDADGELLIVPERGGLLLRTEFGLLHAEPGHVALIPRGVRFRVQLLDEDARGYVCENYGAPFQLPDLGPIGANGLANARDF 231 HSP 2 Score: 90.5077 bits (223), Expect = 1.870e-55 Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 L Y SGFGN +SEA+ GALP G+NSP P GLYAEQ+SGT+FT PR N+RSWLYRI+PS Sbjct: 12 LAYLSGFGNEHASEAVAGALPEGRNSPQRAPLGLYAEQLSGTAFTEPRAHNRRSWLYRIRPS 73
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_STRAW (Homogentisate 1,2-dioxygenase OS=Streptomyces avermitilis GN=hmgA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 7.043e-55 Identity = 71/134 (52.99%), Postives = 94/134 (70.15%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 P +LRW P+ P + TDF+ GL+T+ G G + R G A+H+Y AN SMD F +ADG+ L+VP++G L + TE G L PG++A++P+G RF V L D +RGY+ E +G FQLPDLGPIGANGLAA RDF Sbjct: 99 PNRLRWNPLPEPPAGTDFVGGLWTLGGNGDATQRTGMAVHLYHANSSMDR-VFSDADGELLIVPERGGLLLRTEFGLLHAEPGQVALVPRGVRFRVDLLDESARGYVCENYGAPFQLPDLGPIGANGLAAARDF 231 HSP 2 Score: 86.2705 bits (212), Expect = 7.043e-55 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 L + +GFGN +SEA+ GALP G+NSP P GLYAEQ+SG++FT PR N+RSWLYRI+PS Sbjct: 12 LAHLTGFGNEHASEAVPGALPEGRNSPQRAPLGLYAEQLSGSAFTEPRAHNRRSWLYRIRPS 73
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEP1 (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hmgA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.197e-54 Identity = 74/135 (54.81%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 P +LRW P IP PTDFI+G + ++ G +I++Y AN+SM+ F NADG+ L+VP++GRL IATE G +EV P EIAV+P+G +F V L DG +RGYIAE G +LPDLGPIG+NGLA PRDFL Sbjct: 93 PNRLRWSPQPIPAEPTDFIEGWLPMAANAAAEKPAGVSIYIYCANRSMER-VFFNADGELLLVPEQGRLRIATELGVMEVEPLEIAVIPRGMKFRVELLDGQARGYIAENHGAPLRLPDLGPIGSNGLANPRDFL 226 HSP 2 Score: 88.1965 bits (217), Expect = 1.197e-54 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 90 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 DL+Y SGFGN F+SEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI+PS Sbjct: 8 DLHYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPS 70
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEPK (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain KT2440) GN=hmgA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.561e-54 Identity = 74/135 (54.81%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 P +LRW P IP PTDFI+G + + G +I++Y AN+SM+ F NADG+ L+VP++GRL IATE G +EV P EIAV+P+G +F V L DG +RGYIAE G +LPDLGPIG+NGLA PRDFL Sbjct: 93 PNRLRWSPQPIPAEPTDFIEGWLPMAANAGAEKPAGVSIYIYRANRSMER-VFFNADGELLLVPEQGRLRIATELGVMEVEPLEIAVIPRGMKFRVELLDGQARGYIAENHGAPLRLPDLGPIGSNGLANPRDFL 226 HSP 2 Score: 88.1965 bits (217), Expect = 1.561e-54 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 90 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 DL+Y SGFGN F+SEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI+PS Sbjct: 8 DLHYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPS 70
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEPG (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain GB-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.652e-54 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 P +LRW P IP PTDFI+G + ++ G +I++Y AN+SM+ F NADG+ L+VP++GRL IATE G +EV P EIAV+P+G +F V L DG +RGYIAE G ++PDLGPIG+NGLA PRDFL Sbjct: 93 PNRLRWSPQPIPAEPTDFIEGWLPMVANAAAEKPAGVSIYIYRANRSMER-VFFNADGELLLVPEQGRLRIATELGVMEVEPLEIAVIPRGMKFRVELLDGQARGYIAENHGAPLRIPDLGPIGSNGLANPRDFL 226 HSP 2 Score: 88.1965 bits (217), Expect = 2.652e-54 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 90 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 DL+Y SGFGN F+SEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI+PS Sbjct: 8 DLHYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPS 70
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSESM (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. tomato GN=hmgA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.652e-54 Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 P +LRW DIP P DFIDGL + ++ G ++++Y AN SM AF +ADG++L+VPQ+GRL I TE G L++ P EIAVLP+G +F+V L DG +RGY+ E G +LP+LGPIG+NGLA PRDFL Sbjct: 94 PNRLRWNAFDIPAEPVDFIDGLIALASTSAADQAEGVSVYVYAANTSMQR-AFFSADGEWLIVPQQGRLRIITEMGVLDIGPLEIAVLPRGLKFSVQLLDGSARGYLCENHGGVLRLPELGPIGSNGLANPRDFL 227 HSP 2 Score: 88.5817 bits (218), Expect = 2.652e-54 Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 84 FSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 F L Y+SGF N FSSEA+ GALP GQNSP P GLYAEQ SGT+FT R +R+WLYRIKPS Sbjct: 7 FEALAYQSGFANQFSSEALPGALPMGQNSPQKHPLGLYAEQFSGTAFTVARNEARRTWLYRIKPS 71
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEF5 (Homogentisate 1,2-dioxygenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hmgA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.457e-54 Identity = 72/136 (52.94%), Postives = 94/136 (69.12%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P+ IP PTDFIDGL + ++ G +++ Y AN+SM+ F NADG+ L+VP+ GRL I TE G L++ P EIAVLP+G +F + L D +RGY+AE G +LPDLGPIG+NGLA PRDFL Sbjct: 93 TPNRLRWSPLQIPSEPTDFIDGLVAMVANSAAQKPAGISVYHYRANRSMER-VFFNADGELLLVPELGRLRIVTELGMLDLEPLEIAVLPRGLKFRIELLDPQARGYVAENHGAPLRLPDLGPIGSNGLANPRDFL 227 HSP 2 Score: 87.0409 bits (214), Expect = 3.457e-54 Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 87 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 S L+Y+SGFGN F+SEA+ GALP GQNSP P+GLYAE SGT+FT R +R+W+YRI+PS Sbjct: 8 SALSYQSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELFSGTAFTMTRSEARRTWMYRIQPS 71
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSE14 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=hmgA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.301e-53 Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 P +LRW DIP P DFIDGL + ++ G ++++Y AN SM AF +ADG++L+VPQ+GRL I TE G L++ P EIAVLP+G +F V L D +RGYI E G +LP+LGPIG+NGLA PRDFL Sbjct: 94 PNRLRWNAFDIPAEPVDFIDGLIPLASTSAADQADGVSVYVYAANTSMQR-AFFSADGEWLIVPQQGRLRIITELGLLDIEPLEIAVLPRGMKFRVQLLDSSARGYICENHGCALRLPELGPIGSNGLANPRDFL 227 HSP 2 Score: 88.5817 bits (218), Expect = 1.301e-53 Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 L Y+SGFGN FSSEA+ GALP GQNSP P GLYAEQ SGT+FT R +R+WLYRIKPS Sbjct: 10 LAYQSGFGNQFSSEALPGALPIGQNSPQKHPLGLYAEQFSGTAFTVARSEARRTWLYRIKPS 71
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEE4 (Homogentisate 1,2-dioxygenase OS=Pseudomonas entomophila (strain L48) GN=hmgA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.697e-53 Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 359 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 TP +LRW P +P PTDFI+G + +S G +I++Y AN+SM+ F NADG+ L+VP++GRL IATE G LEV P EIAV+P+G +F V L D +RGYIAE G ++PDLGPIG+NGLA PRDFL Sbjct: 92 TPNRLRWSPQPMPAEPTDFIEGWLPMVANSASEKPAGVSIYIYRANRSMER-VFFNADGELLLVPEQGRLRIATELGVLEVEPLEIAVIPRGMKFRVELLDDQARGYIAENHGAPLRIPDLGPIGSNGLANPRDFL 226 HSP 2 Score: 85.5001 bits (210), Expect = 1.697e-53 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 L Y SGFGN F+SEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI+PS Sbjct: 9 LQYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMTRSELRRTWLYRIRPS 70
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_PSEU2 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hmgA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.697e-53 Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 362 PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 P +LRW DIP +PTDFIDGL + ++ G ++++YTAN SM AF +ADG++LVVPQ+GRL I TE G L++ P EIAVLP+G +F V L D +RGY+ E G +LP+LGPIG+NGLA RDFL Sbjct: 94 PNRLRWNAFDIPAAPTDFIDGLIPLASTSAAEQAEGVSVYLYTANTSMQR-AFFSADGEWLVVPQQGRLRIVTELGLLDIEPLEIAVLPRGLKFCVQLLDSSARGYLCENHGCALRLPELGPIGSNGLANSRDFL 227 HSP 2 Score: 85.8853 bits (211), Expect = 1.697e-53 Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 93 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSQHMNR 293 L Y+SGFGN FSSEA+ ALP GQNSP P GLYAEQ SGT+FT R +R+WLYRIKPS +R Sbjct: 10 LVYQSGFGNQFSSEALPDALPVGQNSPQKHPLGLYAEQFSGTAFTVARSEARRTWLYRIKPSAAHSR 76 The following BLAST results are available for this feature:
BLAST of CN189604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189604 ID=CN189604; Name=CN189604; organism=Citrus sinensis; type=EST; length=769bpback to top |