CN189604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_EMENI (Homogentisate 1,2-dioxygenase OS=Emericella nidulans GN=hmgA PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.084e-52 Identity = 78/160 (48.75%), Postives = 101/160 (63.12%), Query Frame = 2 Query: 311 AHGKLVSEFDKSNSYTT---------PTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 AH V E D S+ +T P QLRW P D+ D D++ GL+ + G+G ++ G I +Y A K M AF +ADGDFL+V Q G L I TE G+L V P EI V+P+G R+ V+LPDGP RGYI E++ H+QLP+LGPIG+NGLA RDF Sbjct: 75 AHENFVEE-DASSYHTLSDAKKLQHIPNQLRWDPFDL-DETVDWVHGLHLVAGSGDPTVKQGLGILLYAAGKDMGKEAFYSADGDFLIVAQHGVLDIQTELGRLLVRPNEICVIPRGVRYRVTLPDGPVRGYICELYQGHYQLPELGPIGSNGLANARDF 232 HSP 2 Score: 78.9518 bits (193), Expect = 4.084e-52 Identity = 34/60 (56.67%), Postives = 48/60 (80.00%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y++GF + SEAI+GALP G NSP P+GLYAE++SGT+FT+PR N+++W+YRI P+ Sbjct: 14 YQNGFDSYHESEAIEGALPVGHNSPQKAPYGLYAEKLSGTAFTAPRHENKQTWVYRILPA 73
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RHOPB (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB18) GN=hmgA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 9.045e-52 Identity = 67/133 (50.38%), Postives = 86/133 (64.66%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 QLRW P +P F+ G+ T+ AG + G A HMY + SM N F NADG+ + VPQ+G L + TE G + V+PGEIAV+P+G +F V L DGP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 109 QLRWDPPPLPQRAQTFLQGVETMTTAGDVNTQAGMAAHMYLISASMVNQHFYNADGELMFVPQQGGLRLVTEFGVIGVAPGEIAVIPRGVKFRVELIDGPARGYLCENYGGGFTLPERGPIGANCLANARDFL 241 HSP 2 Score: 93.2041 bits (230), Expect = 9.045e-52 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNR 293 Y SGFGNSF +EA+ GALP G+NSP P+GLYAEQ+SG+ FT+PR N+RSWLYRI+PS QH R Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRAPYGLYAEQLSGSPFTAPRGSNERSWLYRIRPSVQHSGR 86
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RHILO (Homogentisate 1,2-dioxygenase OS=Rhizobium loti GN=hmgA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.003e-51 Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 Q RW PV +P PTDFI G+ +I AG + G A H+Y AN+SM + F NADG+ LVVPQ G L TE G +E+ PGEIAVLP+G F L D RGY+ E +G LPD GPIGAN LA PRDF Sbjct: 114 QYRWNPVPMPKEPTDFIQGMRSITTAGDVLGQTGMAAHVYVANRSMVDDHFFNADGELLVVPQVGALRFVTEMGVIELRPGEIAVLPRGLVFKAELVDKDVRGYVCENYGAKLTLPDRGPIGANCLANPRDF 245 HSP 2 Score: 85.5001 bits (210), Expect = 2.003e-51 Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 78 EDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNR 293 ED +Y GFGN F +E + G+LP+G+NSP +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS +H R Sbjct: 18 EDRMAFSYMPGFGNDFETETLPGSLPQGRNSPQRPAYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVKHTGR 90
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_NITHX (Homogentisate 1,2-dioxygenase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=hmgA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.611e-51 Identity = 64/133 (48.12%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 QLRW P IP+ F+ + T+ AG + + G A H+Y +SM + F NADG+ L VPQ G L TE G ++ PGEIAV+P+G +F V +P GP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 109 QLRWDPTPIPEDELTFVQSVRTMTTAGDAHTQTGMAAHIYLITRSMVDQHFYNADGEMLFVPQGGSLRFVTEFGVIDTEPGEIAVIPRGVKFRVEIPSGPARGYLCENYGGAFTLPERGPIGANCLANSRDFL 241 HSP 2 Score: 92.0485 bits (227), Expect = 2.611e-51 Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGANERSWLYRIRPS 80
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_BRAJA (Homogentisate 1,2-dioxygenase OS=Bradyrhizobium japonicum GN=hmgA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.783e-51 Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 347 NSYTTP-TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 + Y P Q+RW P +P F+ G+ T+ AG + G A H+Y KSM + F NADG+ + V Q+G L + TE G+++ PGEI V+P+G +F V +P+GP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 101 HEYDLPIAQMRWDPTPVPKEEVTFVQGVQTMTTAGDVNTQAGMAAHVYLITKSMVDQHFYNADGELMFVLQQGNLRLVTEFGRIDAEPGEIVVIPRGVKFRVEIPNGPARGYLCENYGGAFTLPERGPIGANCLANARDFL 241 HSP 2 Score: 92.4337 bits (228), Expect = 5.783e-51 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNR 293 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS +H R Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVKHSGR 86
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RHOPT (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain TIE-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.176e-50 Identity = 63/133 (47.37%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 QLRW P +P F+ G+ T+ AG + G A H+Y +SM + F NADG+ + VPQ+G L + TE G + + P EIAV+P+G +F V L DGP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 109 QLRWDPPPMPQEKLTFLQGVRTMTTAGDVNTQAGMATHLYLITQSMVDQHFYNADGEMMFVPQQGSLRLVTEFGIITIEPAEIAVIPRGIKFRVELVDGPARGYLCENYGGAFTLPERGPIGANCLANSRDFL 241 HSP 2 Score: 93.2041 bits (230), Expect = 2.176e-50 Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNRLSLECLLMGSW 326 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS +H R + MG W Sbjct: 21 YMSGFGNSFETEALPGALPVGRNSPQRCAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHSGRFAKTD--MGLW 95
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RHOPA (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris GN=hmgA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.837e-50 Identity = 63/133 (47.37%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 QLRW P +P F+ G+ T+ AG + G A H+Y +SM + F NADG+ + VPQ+G L + TE G + + P EIAV+P+G +F V L DGP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 109 QLRWDPPPMPQEALTFLQGVRTMTTAGDVNTQAGMATHLYLITQSMVDQHFYNADGEMMFVPQQGSLRLVTEFGIITIEPAEIAVIPRGVKFRVELVDGPARGYLCENYGGAFTLPERGPIGANCLANSRDFL 241 HSP 2 Score: 93.2041 bits (230), Expect = 2.837e-50 Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNRLSLECLLMGSW 326 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS +H R + MG W Sbjct: 21 YMSGFGNSFETEALPGALPVGRNSPQRCAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHSGRFAKTD--MGLW 95
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RHOP5 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisA53) GN=hmgA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 8.187e-50 Identity = 63/133 (47.37%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 QLRW P +P F+ G+ T+ AG + + G A H+Y SM + AF NADG+ + VPQ+G L TE G+++ PGEI V+P+G +F V L GP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 109 QLRWDPPPLPQHEQTFLQGVVTMTTAGDANTQAGMAAHIYLITASMVDQAFYNADGELMFVPQQGSLRFVTEFGRIDAGPGEIVVIPRGVKFRVELTGGPARGYLCENYGGAFTLPERGPIGANCLANARDFL 241 HSP 2 Score: 89.3521 bits (220), Expect = 8.187e-50 Identity = 42/68 (61.76%), Postives = 53/68 (77.94%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNRLS 299 Y SGF NSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS +H R + Sbjct: 21 YMSGFKNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGSNERSWLYRIRPSVKHSGRFA 88
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RHOPS (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB5) GN=hmgA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 8.187e-50 Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 QLRW +P F+ G+ T+ AG + G A HMY ++SM + F NADG+ + VPQ+GRL + TE G + + P EIAV+P+G +F V L DGP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 109 QLRWDAPPMPTEEVTFVQGVRTMTTAGDVNTQAGMAAHMYLISRSMVDQHFYNADGELMFVPQQGRLRLVTEFGVIAIEPAEIAVIPRGVKFRVELVDGPARGYLCENYGGAFTLPERGPIGANCLANSRDFL 241 HSP 2 Score: 89.7373 bits (221), Expect = 8.187e-50 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNRLSLECLLMGSW 326 Y SGFGNSF +EA+ GALP G+NSP +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS +H R + MG W Sbjct: 21 YMSGFGNSFETEALPGALPVGRNSPQRAAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHSGRFAKAD--MGLW 95
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_RHOP2 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain HaA2) GN=hmgA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 5.233e-49 Identity = 63/133 (47.37%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 368 QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFL 766 QLRW +P F+ G+ T+ AG + G A HMY +SM + F NADG+ + VPQ+G L + TE G + + P EIAV+P+G +F V L DGP+RGY+ E +G F LP+ GPIGAN LA RDFL Sbjct: 109 QLRWDAPSMPQEDLTFLQGVRTMTTAGDVNTQAGMATHMYLITQSMVDQHFYNADGELMFVPQQGSLRLVTEFGVISIEPAEIAVIPRGVKFRVELVDGPARGYLCENYGGAFTLPERGPIGANCLANSRDFL 241 HSP 2 Score: 89.7373 bits (221), Expect = 5.233e-49 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS-QHMNRLSLECLLMGSW 326 Y SGFGNSF +EA+ GALP G+NSP +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS +H R + MG W Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRAAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHSGRFTKAD--MGLW 95 The following BLAST results are available for this feature:
BLAST of CN189604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189604 ID=CN189604; Name=CN189604; organism=Citrus sinensis; type=EST; length=769bpback to top |