CN189604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_LEGPA (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Paris) GN=hmgA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.408e-39 Identity = 57/136 (41.91%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 359 TPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 +P +RW P+ + DF++GL+ I AGS + + Y N SM + F N DG+ L VP G + + TE GKL +S G IAV+P+G +F V + ++GY+ E G LP LGPIGANGLA PR F Sbjct: 83 SPNAMRWSPLYNSSQIKCDFVEGLFHI--AGSPLVN----TYTYYCNHSMSDKYFANNDGELLFVPYAGEIHLHTEFGKLILSSGSIAVIPRGVKFKVEVISKEAKGYLCENSGNPLTLPQLGPIGANGLANPRHF 212 HSP 2 Score: 83.1889 bits (204), Expect = 1.408e-39 Identity = 40/60 (66.67%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y GFGN SEA+ GALP QNSP C GLYAEQ+SGTSFT PR N RSWLYRI P+ Sbjct: 2 YLQGFGNYHHSEAVKGALPTNQNSPQHCSLGLYAEQLSGTSFTRPRHNNLRSWLYRILPT 61
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_LEGPC (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Corby) GN=hmgA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.390e-39 Identity = 60/148 (40.54%), Postives = 84/148 (56.76%), Query Frame = 2 Query: 332 EFDKSNSYT---TPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 EF+ +S+ +P +RW P+ + DF++GL+ I AGS + + Y N SM + F N DG+ L VP G + + TE GKL +S G IAV+P+G +F V + ++GY+ E G LP LGPIGANGLA PR F Sbjct: 71 EFNIMHSFVDEFSPNAMRWSPLYNSSQIKCDFVEGLFHI--AGSPLVN----TYTYYCNHSMSDKYFANNDGELLFVPYAGEIHLYTEFGKLMLSSGSIAVIPRGVKFKVEVISKEAKGYLCENSGNPLTLPQLGPIGANGLANPRHF 212 HSP 2 Score: 81.2629 bits (199), Expect = 2.390e-39 Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y GFGN SEA+ GALP QNSP C GLYAEQ+SGT+FT PR N RSWLYRI P+ Sbjct: 2 YLQGFGNYHHSEAVKGALPPNQNSPQHCNLGLYAEQLSGTAFTRPRHNNLRSWLYRILPT 61
BLAST of CN189604 vs. ExPASy Swiss-Prot
Match: HGD_LEGPH (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hmgA PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.114e-39 Identity = 57/136 (41.91%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 359 TPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDF 763 +P +RW P+ + DF++GL+ I AGS + + Y N SM + F N DG+ L VP G + + TE GKL +S G IAV+P+G +F V + ++GY+ E G LP LGPIGANGLA PR F Sbjct: 83 SPNAMRWSPLYNSSQIKCDFVEGLFHI--AGSPLVN----TYTYYCNHSMSDKYFANNDGELLFVPYAGEIHLHTEFGKLMLSSGSIAVIPRGVKFKVEVISKEAKGYLCENSGNPLTLPQLGPIGANGLANPRHF 212 HSP 2 Score: 81.6481 bits (200), Expect = 3.114e-39 Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 99 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 278 Y GFGN SEA+ GALP QNSP C GLYAEQ+SGT+FT PR N RSWLYRI P+ Sbjct: 2 YLQGFGNYHHSEAVKGALPPNQNSPQHCSLGLYAEQLSGTAFTRPRHNNLRSWLYRILPT 61 The following BLAST results are available for this feature:
BLAST of CN189604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189604 ID=CN189604; Name=CN189604; organism=Citrus sinensis; type=EST; length=769bpback to top |