CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEAB (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hmgA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.988e-43 Identity = 83/142 (58.45%), Postives = 108/142 (76.06%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA ++ P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 289 DPSIFTVLTSPTSVHGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIA--ADLKPHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEA7 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain PA7) GN=hmgA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.988e-43 Identity = 83/142 (58.45%), Postives = 108/142 (76.06%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA ++ P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 289 DPSIFTVLTSPTSVHGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIA--ADLRPHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURM1 (Homogentisate 1,2-dioxygenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hmgA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.514e-43 Identity = 80/145 (55.17%), Postives = 105/145 (72.41%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + TD PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A P+K+ +TMAFMFE+ + R +AL++ + +Y+ CW G+R HF+ E+ Sbjct: 300 DPSIFLVLHSQTDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASA-SDTTKPHKVDNTMAFMFETRTLIRPTRYALDTAQLQANYFECWQGIRKHFNPEQ 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_XANCP (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 82/141 (58.16%), Postives = 102/141 (72.34%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKADGF PGGASLH+CM+ HGPD T++ ++ + P IT+TMAFMFE+ + R AL +P DY +CW GLR F Sbjct: 310 DPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKADGFAPGGASLHNCMSGHGPDAATFDKA-SQADLSRPDVITETMAFMFETRAVLRPTAQALHAPHRQGDYQQCWAGLRKAF 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_XANC8 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 82/141 (58.16%), Postives = 102/141 (72.34%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKADGF PGGASLH+CM+ HGPD T++ ++ + P IT+TMAFMFE+ + R AL +P DY +CW GLR F Sbjct: 310 DPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKADGFAPGGASLHNCMSGHGPDAATFDKA-SQADLSRPDVITETMAFMFETRAVLRPTAQALHAPHRQGDYQQCWAGLRKAF 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RALEJ (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain JMP134) GN=hmgA PE=3 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI VL +P+D PGV +DFVIF PRWL E++FRPP++HRN SEFMGLI G Y+AKADGF PGGASLH+CM+ HGPD T+ A + P+ ITDTMAFMFE+ + R P+A S + DYY CW GL+ HF+ Sbjct: 295 DPSIFLVLQSPSDTPGVDTIDFVIFGPRWLAMENSFRPPWFHRNIASEFMGLITGVYDAKADGFAPGGASLHNCMSGHGPDADTF-AKATSADTSTPHHITDTMAFMFETPGVIRPTPYAARSASLQQDYYTCWQGLKKHFN 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURCM (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 80/145 (55.17%), Postives = 104/145 (71.72%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A P+K+ TMAFMFE+ + R +AL++ + DY+ CW G+R HF+ E+ Sbjct: 300 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASA-SDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQPDYFECWQGIRKHFNPEQ 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURCH (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain HI2424) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 80/145 (55.17%), Postives = 104/145 (71.72%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL A +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A P+K+ TMAFMFE+ + R +AL++ + DY+ CW G++ HF+ E+ Sbjct: 300 DPSIFLVLQAQSDTPGVDTIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASA-SDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQGIKKHFNPEQ 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURCA (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain AU 1054) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 80/145 (55.17%), Postives = 104/145 (71.72%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL A +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A P+K+ TMAFMFE+ + R +AL++ + DY+ CW G++ HF+ E+ Sbjct: 300 DPSIFLVLQAQSDTPGVDTIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASA-SDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQGIKKHFNPEQ 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURA4 (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain MC40-6) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 80/145 (55.17%), Postives = 104/145 (71.72%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A P+K+ TMAFMFE+ + R +AL++ + DY+ CW G+R HF+ E+ Sbjct: 300 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASA-SDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQGIRKHFNPEQ 443 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |