CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BORPE (Homogentisate 1,2-dioxygenase OS=Bordetella pertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 88/147 (59.86%), Postives = 107/147 (72.79%), Query Frame = -1 Query: 269 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEA 706 DPSI TVLT+P+D PG A +DF IFPPR L E+TFRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD T+E A+ A S+A + I DTMAFMFE+ + R AL SP DYY+CW GL+ HF E+A Sbjct: 288 DPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIHGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQA--HYIRDTMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA 432
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BORPA (Homogentisate 1,2-dioxygenase OS=Bordetella parapertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 88/147 (59.86%), Postives = 107/147 (72.79%), Query Frame = -1 Query: 269 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEA 706 DPSI TVLT+P+D PG A +DF IFPPR L E+TFRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD T+E A+ A S+A + I DTMAFMFE+ + R AL SP DYY+CW GL+ HF E+A Sbjct: 288 DPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIHGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQA--HYIRDTMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA 432
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BORBR (Homogentisate 1,2-dioxygenase OS=Bordetella bronchiseptica GN=hmgA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43 Identity = 88/147 (59.86%), Postives = 107/147 (72.79%), Query Frame = -1 Query: 269 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEA 706 DPSI TVLT+P+D PG A +DF IFPPR L E+TFRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD T+E A+ A S+A + I DTMAFMFE+ + R AL SP DYY+CW GL+ HF E+A Sbjct: 288 DPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIHGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQA--HYIRDTMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA 432
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEPK (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain KT2440) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA ++ P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 290 DPSIFTVLTSPTSVHGMANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLINGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEPG (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain GB-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA ++ P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 290 DPSIFTVLTSPTSVHGLANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLINGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEP1 (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA ++ P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 290 DPSIFTVLTSPTSVHGMANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLINGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURCC (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain MC0-3) GN=hmgA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42 Identity = 80/145 (55.17%), Postives = 104/145 (71.72%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL A +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A P+K+ TMAFMFE+ + R +AL++ + DY+ CW G++ HF+ E+ Sbjct: 300 DPSIFLVLQAQSDTPGVDTIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASA-SDTTKPHKVDATMAFMFETRTLIRPTCYALDTAQLQADYFECWQGIKKHFNPEQ 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEPW (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain W619) GN=hmgA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.451e-42 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA ++ P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 290 DPSIFTVLTSPTSVHGLANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLISGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEE4 (Homogentisate 1,2-dioxygenase OS=Pseudomonas entomophila (strain L48) GN=hmgA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.895e-42 Identity = 84/142 (59.15%), Postives = 106/142 (74.65%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA+GFLPGGASLH M+ HGPD +T + I+ + P+KI +TMAFMFE+ + R ALESP + DY CW L S F+ Sbjct: 290 DPSIFTVLTSPTSVHGMANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAEGFLPGGASLHGVMSAHGPDAETCDKAIS--VDLAPHKIDNTMAFMFETSQVLRPSRQALESPQLQADYDSCWATLPSTFN 429
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURS3 (Homogentisate 1,2-dioxygenase OS=Burkholderia sp. (strain 383) GN=hmgA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.895e-42 Identity = 79/145 (54.48%), Postives = 104/145 (71.72%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A P+K+ TMAFMFE+ + R +AL++ + DY+ CW G++ HF+ E+ Sbjct: 300 DPSIFLVLQSQSDTPGVDTIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASA-SDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQGIKKHFNPEQ 443 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |