CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BORA1 (Homogentisate 1,2-dioxygenase OS=Bordetella avium (strain 197N) GN=hmgA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.233e-42 Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = -1 Query: 269 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEA 706 DPSI TVLT+P+D PG A LDF IFPPR L E+TFRPP++HRN SEFMGLI+G Y+AKA+GF PGGASLH+CM+ HGPD T+E A++A S+A + I DTMAFMFE+ + R AL S + DYY+CW L+ HF+ E+A Sbjct: 288 DPSIFTVLTSPSDTPGTANLDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIQGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASVADTSKA--HYIRDTMAFMFETRRVIRPTRQALASAQLQGDYYQCWQDLKKHFNPEKA 432
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_AGRRK (Homogentisate 1,2-dioxygenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=hmgA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.233e-42 Identity = 83/141 (58.87%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLTAPT+ G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M PHGPD +E A SE P K+ TMAFMFE+ ++ +A E + +Y CW GL F Sbjct: 308 DPSIFTVLTAPTESAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGISLHNMMLPHGPDASGFEK--ASNSELKPVKLDHTMAFMFETRYPQQVTKYAAELETLQDNYLECWDGLERRF 446
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_CAUSK (Homogentisate 1,2-dioxygenase OS=Caulobacter sp. (strain K31) GN=hmgA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.515e-42 Identity = 82/136 (60.29%), Postives = 102/136 (75.00%), Query Frame = -1 Query: 299 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIG 706 DPSI TVLTAP++ PG A +DFVIFPPRW+VAEHTFRPP++HRN MSEFMGL+ G Y+AKA GF PGGASLH+ M+ HGPD +++A A ++ P+KI TMAFMFES + R +ALE+ + DY CW G Sbjct: 287 DPSIFTVLTAPSEIPGTANVDFVIFPPRWMVAEHTFRPPWFHRNVMSEFMGLVTGAYDAKAGGFSPGGASLHNMMSDHGPDVASHKA--ASEADLSPHKIEATMAFMFESRWVIRPTKYALETSELQADYDACWTG 420
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHISN (Homogentisate 1,2-dioxygenase OS=Rhizobium sp. (strain NGR234) GN=hmgA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42 Identity = 82/142 (57.75%), Postives = 100/142 (70.42%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLTAP+ + G A +DFV+FPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M HGPDT +E A E P K+ +TMAFMFE+ ++ +A E + DY CW GLR F+ Sbjct: 306 DPSIFTVLTAPSGEEGTANVDFVLFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGRYDAKEEGFVPGGMSLHNMMLAHGPDTSGFEK--ATNGELKPVKLDNTMAFMFETRFPQQLTRFAAELETLQDDYIDCWAGLRKRFN 445
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURTA (Homogentisate 1,2-dioxygenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hmgA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42 Identity = 80/145 (55.17%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASAIDT-SRPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_XANOR (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae GN=hmgA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.407e-42 Identity = 81/148 (54.73%), Postives = 103/148 (69.59%), Query Frame = -1 Query: 263 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADN 706 DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKA+GF PGGASLH+CM+ HGPD T++ ++ P I +TMAFMFE+ + R AL + DY +CW GLR+ F + A N Sbjct: 289 DPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKAEGFAPGGASLHNCMSGHGPDAATFDKA-SQADLTRPDVIAETMAFMFETRAVLRPTQQALSAAHRQADYQQCWSGLRAAFQHPPAKN 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_XANOP (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hmgA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.407e-42 Identity = 81/148 (54.73%), Postives = 103/148 (69.59%), Query Frame = -1 Query: 263 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADN 706 DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKA+GF PGGASLH+CM+ HGPD T++ ++ P I +TMAFMFE+ + R AL + DY +CW GLR+ F + A N Sbjct: 289 DPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKAEGFAPGGASLHNCMSGHGPDAATFDKA-SQADLTRPDVIAETMAFMFETRAVLRPTQQALSAAHRQADYQQCWSGLRAAFQHPPAKN 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_XANOM (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hmgA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.407e-42 Identity = 81/148 (54.73%), Postives = 103/148 (69.59%), Query Frame = -1 Query: 263 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADN 706 DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKA+GF PGGASLH+CM+ HGPD T++ ++ P I +TMAFMFE+ + R AL + DY +CW GLR+ F + A N Sbjct: 289 DPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKAEGFAPGGASLHNCMSGHGPDAATFDKA-SQADLTRPDVIAETMAFMFETRAVLRPTQQALSAAHRQADYQQCWSGLRAAFQHPPAKN 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BORPD (Homogentisate 1,2-dioxygenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=hmgA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.407e-42 Identity = 86/142 (60.56%), Postives = 102/142 (71.83%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P+D PG A +DF IFPPR L E+TFRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD T+E AT A S+A + I DTMAFMFE+ + R AL S + DYY CW GL HF Sbjct: 288 DPSIFTVLTSPSDTPGTANMDFAIFPPRVLAMENTFRPPWFHRNVASEFMGLIHGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKATAADTSQA--HYIRDTMAFMFETRRVIRPTAQALASAQLQSDYYECWQGLNKHF 427
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHILW (Homogentisate 1,2-dioxygenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.229e-41 Identity = 82/141 (58.16%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI +VLTAPT+ G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M PHGPD +E A +E P K+ TMAFMFE+ ++ +A E + DY CW GL F Sbjct: 308 DPSIFSVLTAPTEDAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGMSLHNMMLPHGPDALAFEK--AANAELKPVKLDHTMAFMFETRYPQQLTKYAAELETLQDDYLECWDGLERKF 446 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |