CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHIE6 (Homogentisate 1,2-dioxygenase OS=Rhizobium etli (strain CIAT 652) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.229e-41 Identity = 82/141 (58.16%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI +VLTAPT+ G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M PHGPD +E A +E P K+ TMAFMFE+ ++ +A E + DY CW GL F Sbjct: 308 DPSIFSVLTAPTEDAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGMSLHNMMLPHGPDALAFEK--AANAELKPVKLDHTMAFMFETRYPQQLTKYAAELETLQDDYLECWDGLERKF 446
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RALEH (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI VL +P+ PGV +DFVIF PRWL + +FRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD +T+E A + P++I DTMAFMFE+ + R P+A +S + DYY CW GL+ HF+ Sbjct: 295 DPSIFLVLQSPSATPGVDTIDFVIFGPRWLAMQDSFRPPWFHRNIASEFMGLITGVYDAKAEGFAPGGASLHNCMSGHGPDAETFEKASA-ADTSKPHRIEDTMAFMFETPGVIRPTPYAAQSASLQQDYYTCWQGLKKHFN 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURPS (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASSIDT-SKPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURP1 (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei (strain 1710b) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASSIDT-SKPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURP0 (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei (strain 1106a) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASSIDT-SKPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURMS (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain SAVP1) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASSIDT-SKPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURMA (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASSIDT-SKPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURM9 (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain NCTC 10229) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASSIDT-SKPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURM7 (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain NCTC 10247) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + + + P K+ DTMAFMFE+ + R +AL++ + +Y+ CW GL+ HF+ E+ Sbjct: 306 DPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASSIDT-SKPNKVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFNPEQ 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RALPJ (Homogentisate 1,2-dioxygenase OS=Ralstonia pickettii (strain 12J) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI VL +P+ PGV +DFVIFPPRWL AE+TFRPP++HRN SEFMGLI+G Y+AKA+GF+PGGASLH+CM+ HGPD T+E + P+K+ TMAFMFE+ + R +A ES + Y+ CW GL+ HF Sbjct: 304 DPSIFLVLQSPSATPGVDTIDFVIFPPRWLAAENTFRPPWFHRNVASEFMGLIQGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKA-SNSDTTKPHKVDATMAFMFETPAVIRPTRFAAESAQLQAKYFECWQGLKKHF 443 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |