CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_DROME (Homogentisate 1,2-dioxygenase OS=Drosophila melanogaster GN=hgo PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 84/143 (58.74%), Postives = 100/143 (69.93%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALES-PFMDHDYYRCWIGLRSHF 706 DPSI TVLT P+ + G A+ DFVIFPPRW V EHTFRPPYYHRNCMSEFMGLI G YEAK DGF GGA+LHS MTPHGPD K +E A ++ P ++ + T AFMFES L + W E+ +D YY CW L+++F Sbjct: 294 DPSIFTVLTCPSLRAGTAIADFVIFPPRWSVQEHTFRPPYYHRNCMSEFMGLILGKYEAKEDGFAAGGATLHSMMTPHGPDVKCFEG--ASNAKLVPERVAEGTQAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNF 434
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_CAUCR (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus GN=hmgA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = -1 Query: 299 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIG 706 DPSI TVLT+P+D PG A DFVIFPPRW+VAE TFRPP++HRN MSEFMGLI G Y+AKA GF+PGGASLH+CM+ HGPD +++ A P+KI TMAFMFES + R ALES + DY CW G Sbjct: 285 DPSIFTVLTSPSDTPGTANCDFVIFPPRWMVAEDTFRPPWFHRNVMSEFMGLIHGAYDAKAGGFVPGGASLHNCMSDHGPDVASHKK--ATEVVLAPHKIDGTMAFMFESRWVFRPTHLALESAALQSDYDACWTG 418
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_CAUCN (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = -1 Query: 299 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIG 706 DPSI TVLT+P+D PG A DFVIFPPRW+VAE TFRPP++HRN MSEFMGLI G Y+AKA GF+PGGASLH+CM+ HGPD +++ A P+KI TMAFMFES + R ALES + DY CW G Sbjct: 285 DPSIFTVLTSPSDTPGTANCDFVIFPPRWMVAEDTFRPPWFHRNVMSEFMGLIHGAYDAKAGGFVPGGASLHNCMSDHGPDVASHKK--ATEVVLAPHKIDGTMAFMFESRWVFRPTHLALESAALQSDYDACWTG 418
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURCJ (Homogentisate 1,2-dioxygenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41 Identity = 78/145 (53.79%), Postives = 103/145 (71.03%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL A +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ H PD T+E + P+K+ TMAFMFE+ + R +AL++ + DY+ CW G++ HF+ E+ Sbjct: 300 DPSIFLVLQAQSDTPGVDTIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHRPDADTFEKA-SVSDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQGIKKHFNPEQ 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHIEC (Homogentisate 1,2-dioxygenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=hmgA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI +VLTAPT+ G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M PHGPD +E A E P K+ TMAFMFE+ ++ +A E + DY CW GL F Sbjct: 308 DPSIFSVLTAPTEDAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGISLHNMMLPHGPDALAFEK--ASNVELKPVKLDHTMAFMFETRYPQQLTKYAAELETLQDDYLECWDGLERKF 446
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RALSO (Homogentisate 1,2-dioxygenase OS=Ralstonia solanacearum GN=hmgA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI VL + +D PGV +DFVIFPPRWL EH+FRPP++HRN SEFMGLI+G Y+AKA+GF+PGGASLH+CMT HGPD +T+E + P+K+ TMAFMFE+ + R +A ES + Y+ CW GL+ HF Sbjct: 304 DPSIFLVLQSVSDTPGVDAIDFVIFPPRWLAMEHSFRPPWFHRNIASEFMGLIQGVYDAKAEGFVPGGASLHNCMTGHGPDAETFEKA-SHADTTQPHKVEATMAFMFETRGVIRPTRFAAESAQLQARYFECWQGLKKHF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEPF (Homogentisate 1,2-dioxygenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.737e-41 Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+PT G+A LDFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA+GF+PGGASLHSCM+ HGPD +T T A ++ P KI +TMAFMFE+ + R +AL+ P + Y CW L + F Sbjct: 288 DPSIFTVLTSPTSVHGLANLDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGEYDAKAEGFVPGGASLHSCMSAHGPDGET--CTKAINADLKPAKIDNTMAFMFETSQVLRPSRFALDCPQLQSTYDACWATLPATF 426
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_XANC5 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hmgA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.574e-41 Identity = 80/141 (56.74%), Postives = 100/141 (70.92%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKA+GF PGGASLH+CM+ HGPD T++ ++ P I DTMAFMFE+ + R AL + DY +CW GLR+ F Sbjct: 291 DPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKAEGFAPGGASLHNCMSGHGPDAATFDKA-SQADLTRPDVIADTMAFMFETRAVLRPTQQALNAAHRQADYQQCWSGLRAAF 430
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_XANAC (Homogentisate 1,2-dioxygenase OS=Xanthomonas axonopodis pv. citri GN=hmgA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.574e-41 Identity = 80/141 (56.74%), Postives = 100/141 (70.92%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKA+GF PGGASLH+CM+ HGPD T++ ++ P I DTMAFMFE+ + R AL + DY +CW GLR+ F Sbjct: 310 DPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKAEGFAPGGASLHNCMSGHGPDAATFDKA-SQADLTRPDVIADTMAFMFETRAVLRPTQQALSAAHRQADYQQCWSGLRAAF 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BURVG (Homogentisate 1,2-dioxygenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hmgA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.574e-41 Identity = 78/145 (53.79%), Postives = 103/145 (71.03%), Query Frame = -1 Query: 272 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE 706 DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A + P+K+ TMAFMFE+ + R +AL++ + DY+ CW + HF+ E+ Sbjct: 300 DPSIFLVLQSQSDSPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASAIDT-TRPHKVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQRIEKHFNPEQ 443 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |