CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHIL3 (Homogentisate 1,2-dioxygenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=hmgA PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41 Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI +VLTAP++ G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M PHGPD +E A +E P K+ TMAFMFE+ ++ +A E + +Y CW GL F Sbjct: 308 DPSIFSVLTAPSEDAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGISLHNMMLPHGPDALAFEK--ASNTELKPVKLDHTMAFMFETRYAQQLTKYAAELETLQDNYLECWDGLERKF 446
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_CAEEL (Homogentisate 1,2-dioxygenase OS=Caenorhabditis elegans GN=hgo-1 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 7.963e-41 Identity = 84/143 (58.74%), Postives = 102/143 (71.33%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLTAP+ K G A+ DFVIFPPRW A++TFRPPYYHRNCMSE+MGLI G YEAK GF PGG SLHS MTPHGPD +E +A ++ P ++ + TM+FMFES L I WA+ +D DYY+ W L+ HF+ Sbjct: 295 DPSIFTVLTAPSVKHGTAIADFVIFPPRWGCADNTFRPPYYHRNCMSEYMGLITGCYEAKEGGFKPGGGSLHSMMTPHGPDFNCFE--MASNADLKPQRVAEGTMSFMFESSLNMAITNWAVYQN-VDKDYYKDWQPLKKHFT 434
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHOP5 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisA53) GN=hmgA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40 Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLTAP++ PG A +DFVIFP RW+VA++TFRPP+YH N MSEFMGLI G Y+AK GF+PGGASLH+ M PHGPD + ++ A E P K+T TMAFMFE+ R+ +A S + DY CW GL F Sbjct: 305 DPSIFTVLTAPSETPGTANIDFVIFPERWMVADNTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFVPGGASLHNMMLPHGPDREAFDH--ASNGELKPTKLTGTMAFMFETRYPQRVTEYAATSGLLQPDYADCWTGLEKRF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEU2 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hmgA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = -1 Query: 275 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYE 706 DPSI TVLT+P G A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GF+PGGASLH+CM+ HGPD T E IA +E P++I +TMAFMFE+ + R AL+ P + DY CW + F+ E Sbjct: 291 DPSIFTVLTSPGAIHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGASLHNCMSAHGPDNVTAEKAIA--AELKPHRIDNTMAFMFETGKVLRPSRHALDCPQLQTDYDACWKDMARTFTQE 432
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSESM (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. tomato GN=hmgA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40 Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = -1 Query: 269 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEA 706 DPSI TVLT+P G A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GF+PGG+SLH+CM+ HGPD T E IA ++ P+KI +TMAFMFE+ + R AL P + DY CW G+ F+ E + Sbjct: 291 DPSIFTVLTSPGAVHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGSSLHNCMSAHGPDNITAEKAIA--ADLKPHKIENTMAFMFETGKVLRPSLHALACPQLQADYDACWNGMARTFNKESS 434
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSE14 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=hmgA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.358e-40 Identity = 83/144 (57.64%), Postives = 103/144 (71.53%), Query Frame = -1 Query: 275 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYE 706 DPSI TVLT+P G A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GF+PGGASLH+CM+ HGPD T E IA +E P+KI +TMAFMFE+ + R AL P + DY CW + F+ E Sbjct: 291 DPSIFTVLTSPGAAHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGASLHNCMSAHGPDNVTAEKAIA--AELKPHKIENTMAFMFETGKVLRPSRHALGCPQLQADYDACWNDMTRTFNKE 432
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_SINMW (Homogentisate 1,2-dioxygenase OS=Sinorhizobium medicae (strain WSM419) GN=hmgA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.317e-40 Identity = 81/141 (57.45%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLTAP+ + G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M HGPD +E A E P K+ +TMAFMFE+ ++ +A E + DY CW GL F Sbjct: 308 DPSIFTVLTAPSGEEGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGRYDAKEEGFVPGGMSLHNMMLAHGPDFSGFEK--ASNGELKPVKLDNTMAFMFETRFPQQLTTFAAELETLQDDYIDCWSGLERKF 446
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHOPT (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain TIE-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.317e-40 Identity = 79/141 (56.03%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P++ PG A +DFVIFP RW+VA++TFRPP+YH N MSEFMGLI G Y+AK GF+PGGASLH+ M PHGPD + ++ A E P K+T TMAFMFE+ R+ +A S + DY CW GL F Sbjct: 305 DPSIFTVLTSPSETPGTANIDFVIFPERWMVADNTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFVPGGASLHNMMLPHGPDREAFDH--ASNGELKPVKLTGTMAFMFETRYPQRVTEYAASSGLLQDDYADCWNGLEKRF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHOPA (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris GN=hmgA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.317e-40 Identity = 79/141 (56.03%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P++ PG A +DFVIFP RW+VA++TFRPP+YH N MSEFMGLI G Y+AK GF+PGGASLH+ M PHGPD + ++ A E P K+T TMAFMFE+ R+ +A S + DY CW GL F Sbjct: 305 DPSIFTVLTSPSETPGTANIDFVIFPERWMVADNTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFVPGGASLHNMMLPHGPDREAFDH--ASNGELKPVKLTGTMAFMFETRYPQRVTEYAASSGLLQDDYADCWNGLEKRF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHIME (Homogentisate 1,2-dioxygenase OS=Rhizobium meliloti GN=hmgA PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.952e-40 Identity = 81/141 (57.45%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLTAP+ + G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M HGPD +E A E P K+ +TMAFMFE+ ++ +A E + DY CW GL F Sbjct: 308 DPSIFTVLTAPSGEEGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIYGRYDAKEEGFVPGGMSLHNMMLAHGPDFSGFEK--ASNGELKPVKLDNTMAFMFETRFPQQLTTFAAELDTLQDDYMDCWSGLERKF 446 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |