CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_NITHX (Homogentisate 1,2-dioxygenase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=hmgA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.502e-39 Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P++ G A +DFVIFP RW+VAE+TFRPP+YH N MSEFMGLI G Y+AK GF+PGG SLH+CM PHGPD + ++ A +E P K+T T+AFMFE+ R+ +A S + DY CW GL F Sbjct: 305 DPSIFTVLTSPSEIAGTANIDFVIFPERWVVAENTFRPPWYHMNVMSEFMGLIYGVYDAKPQGFVPGGISLHNCMLPHGPDREAFDH--ASNTELKPVKLTGTLAFMFETRFPQRVTEYAATSDALQDDYADCWQGLERRF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_LEGPH (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hmgA PE=3 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.562e-39 Identity = 78/142 (54.93%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+ ++ PGV+ LDFVIFPPRW+VAEHTFRPPY+HRN M+E MGL+ G Y+AK +GF+PGG S+H+CMTPHGPD ++YE IA + P I +++AFMFE+ ++ A P DY CW G + FS Sbjct: 277 DPSIFTVLTSESEIPGVSNLDFVIFPPRWMVAEHTFRPPYFHRNYMNELMGLVYGEYDAKKEGFIPGGISIHNCMTPHGPDYESYE--IAASQDLKPNYI-NSLAFMFETKDYWQVTEQAYRHPSRQMDYLNCWQGFKIEFS 415
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_LEGPA (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Paris) GN=hmgA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.562e-39 Identity = 78/142 (54.93%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+ ++ PGV+ LDFVIFPPRW+VAEHTFRPPY+HRN M+E MGL+ G Y+AK +GF+PGG S+H+CMTPHGPD ++YE IA + P I +++AFMFE+ ++ A P DY CW G + FS Sbjct: 277 DPSIFTVLTSESEIPGVSNLDFVIFPPRWMVAEHTFRPPYFHRNYMNELMGLVYGEYDAKKEGFIPGGISIHNCMTPHGPDYESYE--IAASQDLKPNYI-NSLAFMFETKDYWQVTEQAYRHPSRQMDYLNCWQGFKIEFS 415
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_LEGPL (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Lens) GN=hmgA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39 Identity = 78/142 (54.93%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+ ++ PGV+ LDFVIFPPRW+VAEHTFRPPY+HRN M+E MGL+ G Y+AK +GF+PGG S+H+CMTPHGPD ++YE IA + P I +++AFMFE+ ++ A P DY CW G + FS Sbjct: 277 DPSIFTVLTSESEIPGVSNLDFVIFPPRWMVAEHTFRPPYFHRNYMNELMGLVYGEYDAKKEGFIPGGISIHNCMTPHGPDYESYE--IAASQDLKPNYI-NSLAFMFETKDYWQVTEQAYRHPSRQIDYLNCWQGFKIEFS 415
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_LEGPC (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Corby) GN=hmgA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39 Identity = 78/142 (54.93%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+ ++ PGV+ LDFVIFPPRW+VAEHTFRPPY+HRN M+E MGL+ G Y+AK +GF+PGG S+H+CMTPHGPD ++YE IA + P I +++AFMFE+ ++ A P DY CW G + FS Sbjct: 277 DPSIFTVLTSESEIPGVSNLDFVIFPPRWMVAEHTFRPPYFHRNYMNELMGLVYGEYDAKKEGFIPGGISIHNCMTPHGPDYESYE--IAASQDLKPNYI-NSLAFMFETKDYWQVTEQAYRHPSRQVDYLNCWQGFKVEFS 415
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_BRAJA (Homogentisate 1,2-dioxygenase OS=Bradyrhizobium japonicum GN=hmgA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39 Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P++ G A +DFVIFP RW+VA++TFRPP+YH N MSEFMGLI G Y+AK GF+PGG SLH+CM PHGPD +E A E P K+T TMAFMFE+ R+ A + + DY CW GL F Sbjct: 305 DPSIFTVLTSPSETAGTANIDFVIFPERWMVADNTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFVPGGMSLHNCMLPHGPDRDAFEH--ASNGELKPVKLTGTMAFMFETRYPQRVTAHAANASTLQDDYADCWKGLEKRF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHOP2 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain HaA2) GN=hmgA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.707e-39 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P++ G A +DFVIFP RW+VAE+TFRPP+YH N MSEFMGLI G Y+AK GF+PGGASLH+ M PHGPD + ++ A E P K+T TMAFMFE+ R+ +A + + DY CW GL F Sbjct: 305 DPSIFTVLTSPSETAGTANIDFVIFPERWMVAENTFRPPWYHMNIMSEFMGLICGVYDAKPQGFVPGGASLHNMMLPHGPDREAFDH--ASNGELKPVKLTGTMAFMFETRYPQRVTEYAATAGTLQDDYADCWRGLEKRF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHOPB (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB18) GN=hmgA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.271e-38 Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P++ G A +DFVIFP RW+VAE+TFRPP+YH N MSEFMGLI G Y+AK GFLPGGASLH+ M PHGPD + ++ A +E P K+ T+AFMFE+ R+ A S + DY CW GL+ F Sbjct: 305 DPSIFTVLTSPSETAGTANIDFVIFPERWMVAENTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFLPGGASLHNMMLPHGPDREAFDH--ASNAELKPVKLEGTLAFMFETRYPQRVTVHAATSSTLQADYAECWRGLQKRF 443
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_STRCO (Homogentisate 1,2-dioxygenase OS=Streptomyces coelicolor GN=hmgA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.660e-38 Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P+D PG+A +DFV+F PRWLV E TFRPPY+HRN MSE+MGLI G Y+AKA+GF+PGG SLH+ M+ HGPD +T++ A +E P +I D +AFMFE+ + P A + + Y W GL HF Sbjct: 299 DPSIFTVLTSPSDTPGLAGVDFVVFAPRWLVGEDTFRPPYFHRNVMSEYMGLIEGAYDAKAEGFVPGGGSLHNMMSAHGPDRETFDR--ASAAELKPQRIDDGLAFMFETRWPVTLTPQAARAEHLQPGYDDVWQGLERHF 437
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHOPS (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB5) GN=hmgA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38 Identity = 77/141 (54.61%), Postives = 95/141 (67.38%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P++ G A +DFVIFP RW+VAE+TFRPP+YH N MSEFMGLI G Y+AK GF PGGASLH+ M PHGPD + ++ A E P K+T TMAFM E+ R+ +A + + DY CW GL F Sbjct: 305 DPSIFTVLTSPSETAGTANIDFVIFPERWMVAENTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFAPGGASLHNMMLPHGPDREAFDH--ASNGELKPVKLTGTMAFMLETRYPQRVTEYAATADTLQDDYADCWRGLEKRF 443 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |