CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_RHILO (Homogentisate 1,2-dioxygenase OS=Rhizobium loti GN=hmgA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37 Identity = 76/142 (53.52%), Postives = 95/142 (66.90%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLTAP+ + G A +DFVIFPPRWLVAE TFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M HGPD +E A ++ P K+ +TMAFMFE+ + + E +Y CW L+ F+ Sbjct: 310 DPSIFTVLTAPSGEEGTANIDFVIFPPRWLVAEDTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGISLHNLMLAHGPDAPGFEK--ASRADLKPVKLDNTMAFMFETRFPQMLTRYGAELETRQDNYIDCWADLKKRFN 449
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_STRAW (Homogentisate 1,2-dioxygenase OS=Streptomyces avermitilis GN=hmgA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37 Identity = 76/141 (53.90%), Postives = 96/141 (68.09%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHF 706 DPSI TVLT+P+D PG+A +DFV+F PRWLV E TFRPPY+HRN MSE+MGLI G Y+AKA GF+PGG SLH+ M+ HGPD +T++ A +E P KI D +AFMFE+ A + + Y W GL+ HF Sbjct: 296 DPSIFTVLTSPSDTPGLAGVDFVVFAPRWLVGEDTFRPPYFHRNVMSEYMGLIEGAYDAKAAGFVPGGGSLHNMMSAHGPDRETFDR--ASAAELRPQKIDDGLAFMFETRWPVTATAQAARAEHLQPAYDDVWQGLQRHF 434
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_EMENI (Homogentisate 1,2-dioxygenase OS=Emericella nidulans GN=hmgA PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35 Identity = 80/145 (55.17%), Postives = 96/145 (66.21%), Query Frame = -1 Query: 284 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAK-ADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALESPFMDHDYY--RCWIGLRSHF 706 DPSI TVLT P+D G A+ DFVIFPPRWLVAE TFRPP+YHRN MSEFMGLI G Y+AK GF P GASLH+ M+ HGPD +E A ++ P KI D +MAFMFES L+ + W L++ + Y W L+ HF Sbjct: 299 DPSIYTVLTGPSDHVGTAIADFVIFPPRWLVAEKTFRPPWYHRNTMSEFMGLITGNYDAKTGGGFQPAGASLHNIMSAHGPDMHAFEG--ASNADLKPTKIGDGSMAFMFESSLMVGVSEWGLKTCQKVQEEYNEHSWQPLKRHF 441 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |