CN189597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHC_TOBAC (Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.372e-62 Identity = 116/129 (89.92%), Postives = 124/129 (96.12%), Query Frame = -2 Query: 291 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGFKMTREHYLNTEEFIDAVANDLRARL 677 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAW+RGLAHRA LDNN RLLDFTEKLEAAC+G VE GKMTKDLALIIHG K++R+HYLNTEEFIDAVA++L+ARL Sbjct: 282 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIHGSKLSRDHYLNTEEFIDAVADELKARL 410
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHC_SOYBN (Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.674e-61 Identity = 115/129 (89.15%), Postives = 124/129 (96.12%), Query Frame = -2 Query: 291 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGFKMTREHYLNTEEFIDAVANDLRARL 677 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD+NA+LLDFTEKLEAAC+G VE GKMTKDLALI+HG K++REHYLNTEEFIDAVA +L ARL Sbjct: 283 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACIGVVEAGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELSARL 411
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHC_SOLTU (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.728e-61 Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = -2 Query: 291 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLAL-IIHGFKMTREHYLNTEEFIDAVANDLRARL 677 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAW+RGLAHRA LDNN RLLDFTEKLEAAC+G VE GKMTKDLAL IIHG K++REHYLNTEEFIDAVA++L+ARL Sbjct: 282 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIIHGSKLSREHYLNTEEFIDAVADELKARL 411
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHP_MEDSA (Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.850e-60 Identity = 112/129 (86.82%), Postives = 123/129 (95.35%), Query Frame = -2 Query: 291 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGFKMTREHYLNTEEFIDAVANDLRARL 677 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD+NA LLDFTEKLEAAC+G VE GKMTKDLALI+HG K++REHYLNTEEFIDAVA +L+ ++ Sbjct: 303 FLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEKLEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKTKI 431
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.409e-44 Identity = 87/129 (67.44%), Postives = 103/129 (79.84%), Query Frame = -2 Query: 291 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGF-KMTREHYLNTEEFIDAVANDLRARL 674 +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR+HQKG ETSTN IASIFAWSRGLAHRA+LDNN L F + LE C+ T+E G MTKDLA I G + R YLNT EF+D + +L+A+L Sbjct: 281 VAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKL 409
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.409e-44 Identity = 87/129 (67.44%), Postives = 103/129 (79.84%), Query Frame = -2 Query: 291 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGF-KMTREHYLNTEEFIDAVANDLRARL 674 +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR+HQKG ETSTN IASIFAWSRGLAHRA+LDNN L F + LE C+ T+E G MTKDLA I G + R YLNT EF+D + +L+A+L Sbjct: 281 VAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKL 409
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.574e-43 Identity = 87/129 (67.44%), Postives = 102/129 (79.07%), Query Frame = -2 Query: 291 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGF-KMTREHYLNTEEFIDAVANDLRARL 674 +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAWSRGLAHRAKLDNN L F LE C+ T+E G MTKDLA I G + R YLNT EF+D + +L+A+L Sbjct: 281 VAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKL 409
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.574e-43 Identity = 87/129 (67.44%), Postives = 103/129 (79.84%), Query Frame = -2 Query: 291 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGF-KMTREHYLNTEEFIDAVANDLRARL 674 +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAWSRGLAHRAKLDNN L F + LE C+ T+E G MTKDLA I G + R YLNT EF+D + +L+A+L Sbjct: 281 VAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFAKALEDVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKL 409
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHP_RAT (Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus GN=Idh2 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43 Identity = 91/133 (68.42%), Postives = 101/133 (75.94%), Query Frame = -2 Query: 282 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGFKMTR--EHYLNTEEFIDAVANDLRARLFGK 674 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG TSTN IASIFAW+RGL HR KLD N L+ F + LE CV TVE G MTKDLA IHG + EH+LNT +F+D + ++L R GK Sbjct: 320 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVQTVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTIKSNL-DRALGK 451
BLAST of CN189597 vs. ExPASy Swiss-Prot
Match: IDHP_PIG (Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Sus scrofa GN=IDH2 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43 Identity = 88/126 (69.84%), Postives = 98/126 (77.78%), Query Frame = -2 Query: 303 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVEFGKMTKDLALIIHGFKMTR--EHYLNTEEFIDAVANDL 674 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG TSTN IASIFAW+RGL HR KLD N L+ F + LE CV TVE G MTKDLA IHG + EH+LNT +F+D + ++L Sbjct: 289 LAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNL 414 The following BLAST results are available for this feature:
BLAST of CN189597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189597 ID=CN189597; Name=CN189597; organism=Citrus sinensis; type=EST; length=678bpback to top |