CN189588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.308e-23 Identity = 60/117 (51.28%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 45 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 395 M K+AC VLL CMV+ AP A+A +TCGQVTS+L C+ CC G+K L A TT DRQ+ C CLK+AA S +L+L A+ LP C VNIPY+ISPS DCS+V+ Sbjct: 3 MVNKIACFVLL-CMVVVAPHAEA-LTCGQVTSTLAPCLPYLMNRGPLGG---CCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.308e-23 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 51 LKLACAVLLMCMVMGAPI-AQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI-RNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 395 +KLAC +LL CM++ PI + AA++CG V S+L AC+ CCSG+K+LNS A TTPDRQ CNC++ AA ++ LN A+G+P+ CGVNIPY+IS S +C VR Sbjct: 5 MKLAC-LLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPA--CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.709e-23 Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 51 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 392 +K CA L+MCM++ AP+A+A +TCG V S L C+ CC GIKSLNSAA + DR++ C CLK+AA SI+ +N A+ LPRQCGV++PY ISP+ +C+ + Sbjct: 7 VKFTCA-LVMCMMVAAPLAEA-ITCGLVASKLAPCIGYLQGAPGPSAA--CCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.709e-23 Identity = 52/109 (47.71%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 66 AVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 392 A++ ++ G AA++CGQV S++ C+ CCSG++SLNSAATTT DR++ CNCLK AGSI LN A+ +P +CGV+IPY ISPS+DCS V Sbjct: 10 ALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAA--CCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.915e-23 Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 54 KLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 395 KLA V L CMV+ PIAQA +TCGQV+S+L C+ CC+GI+++N+ A TT DRQ+ CNCLK + S+ +N N A+ LP +CGVN+PY+ISPS +C+ V+ Sbjct: 8 KLALVVAL-CMVVSVPIAQA-LTCGQVSSNLAPCIAYVRGGGAVPPA--CCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.915e-23 Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 51 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 392 L L V ++ G AA++CGQV S++ C+ CCSG++SLNSAA+TT DR++ CNCLK AGSI LN A+ +P +CGV+IPY ISPS+DCS V Sbjct: 6 LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAA--CCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.915e-23 Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 51 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 392 L L V ++ G AA++CGQV S++ C+ CCSG++SLNSAA+TT DR++ CNCLK AGSI LN A+ +P +CGV+IPY ISPS+DCS V Sbjct: 6 LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAA--CCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 54 KLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 392 +L L+ +++ AP A A+TCGQV S++ C+ CCSG++SL +AA+TT DR++ CNCLK AA I+ LN A+ +P +CGV++PY IS S+DCSRV Sbjct: 5 QLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAA--CCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 54 KLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 392 +L L+ +++ AP A A+TCGQV S++ C+ CCSG++SL +AA+TT DR++ CNCLK AA I+ LN A+ +P +CGV++PY IS S+DCSRV Sbjct: 5 QLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAA--CCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CN189588 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.447e-22 Identity = 53/113 (46.90%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 54 KLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 392 K AV+++ +++ AP A +AVTCGQV S L C+ CC G+++LNSAA TT DRQ+ C CLK ++ L +L +G+P +CGVNIPY ISPS DCSRV Sbjct: 8 KYVAAVMVVALLLAAPAA-SAVTCGQVVSMLAPCIMYATGRVSAPTGG-CCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118 The following BLAST results are available for this feature:
BLAST of CN189588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189588 ID=CN189588; Name=CN189588; organism=Citrus sinensis; type=EST; length=572bpback to top |