DR908772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 67/186 (36.02%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 579 T + G +VTGA++GIG ETA+ LA RG V +A R++ G+ V + I + +V +LD+S S+R FA + ++ + L++LINNAG+M P+ + D E+ N + +K++A RIVNVSS AH I F + E YN+ AY SKLANIL Sbjct: 34 TSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA-----PSRIVNVSSLAHHLG---RIHFHNLQGEKFYNAGLAYCHSKLANIL 211
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 68/192 (35.42%), Postives = 97/192 (50.52%), Query Frame = 1 Query: 43 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA-------------KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 579 G T ++TGA+SG+G TA L G VIM R+ A ++ + +E+ A ++ ELD++SL SVR F E + L++LINNAGI P+M ++D E+QF N + KSS RIV VSS+ +++ I FD +N E +YN Y +SKLANIL Sbjct: 43 GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLL-----KSSAPSRIVVVSSKLYKYG---DINFDDLNSEQSYNKSFCYSRSKLANIL 226
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: RDH12_HUMAN (Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 1.652e-21 Identity = 63/179 (35.20%), Postives = 93/179 (51.96%), Query Frame = 1 Query: 43 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 579 G ++TGA++GIG ETAR LA RG V +A R++ G+ I + +++V +LD+S S+R FA + ++ + L+ILINNAG+M P+ + D E N + +K +A R+VNVSS AH I F + E Y+ AY SKLAN+L Sbjct: 39 GKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGVNHLGHFLLTYLLLERLKVSA-----PARVVNVSSVAHHIG---KIPFHDLQSEKRYSRGFAYCHSKLANVL 209
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: RDH11_MOUSE (Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21 Identity = 64/186 (34.41%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 579 T + G AIVTGA++GIG ETA+ LA RG V +A R++ G+ I +++V +LD++ S+R FA ++ ++ + L++LINNAG+M P+ + D E+ N + +K++A RIVN+SS H I F + E Y++ AY SKLANIL Sbjct: 31 TSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA-----PSRIVNLSSLGHHLG---RIHFHNLQGEKFYSAGLAYCHSKLANIL 208
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: DHRSX_MOUSE (Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 3.681e-21 Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 43 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 570 G AIVTGA++GIG TAR LA G+ V++A + G++V +I E+ S + + LD++SLASVR FA ++ + G PL++L+NNAG+M P ++D E N ++ + + R R+V V S H Y + ++ AY+ + AY QSKLA Sbjct: 43 GRVAIVTGATAGIGRSTARQLARLGMCVVVAGNDEHRGQEVVSSIRAEMGSDRAHFLPLDLASLASVRGFARDFQALGLPLHLLVNNAGVMLEPRAETEDGFERHLGVNFLGHFLLTLLLLPALRASGAE-GRGSRVVTVGSATH---YVGTVDMADLHGRHAYSPYAAYAQSKLA 214
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: RDH13_MOUSE (Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.201e-21 Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 1 Query: 43 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM----AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN-DESAYNSFGAYGQSKLANIL 579 G T IVTGA++GIG +TA LA RG +VI+A R+M A KD+R E + +V A LD++SL S+R+FA + + ++IL+NNA +M P ++D E+QF N D + K+S RI+N+SS AH + I F+ +N Y++ AY QSKLA +L Sbjct: 38 GKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAKDIR----GETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKL-----KASAPSRIINLSSLAHVAGH---IDFEDLNWQMKKYDTKAAYCQSKLAVVL 209
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20 Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 43 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA----------KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 579 G T ++TGA+SG+G TA L G VIM R+ A ++ + +E+ A ++ ELD++SL SVR F E + L++LINNAG+ P+ ++D E+QF N + KSS RIV VSS+ +++ I F+ +N E +YN Y +SKLANIL Sbjct: 44 GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHLGHFLLTNLLLGLL-----KSSAPSRIVVVSSKLYKYG---EINFEDLNSEQSYNKSFCYSRSKLANIL 224
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: WWOX_DROME (WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 68/197 (34.52%), Postives = 98/197 (49.75%), Query Frame = 1 Query: 4 STAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA--MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAY--SEGIRFDKIN-DESAYNSFGAYGQSKLANIL 579 STA +V G D G TA++TGA+ GIG ETAR LA G +I A RN ++ + E I +E P+A+ LD+SSL SV++F E ++ LI NAG+ A P+ + D +E F + + RI+ +SSE+HRFA E + ++ Y S AY +KL N+L Sbjct: 108 STALQVLHGKDLHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQERPAARSRCRFAALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLETLF-------DYKTRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVL 297
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: OXIR_STRAT (Probable oxidoreductase OS=Streptomyces antibioticus PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.090e-16 Identity = 69/187 (36.90%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 31 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF-MLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA---YNSFGAYGQSKLANIL 579 +D TG A+VTG +SG+G ET R LA G V +A R + + + + + + +V A LD+S ASV FA + PL+IL+ NAGIMA P L+ + E+Q ATN T A + + RIV VSS AH A FD + A Y+ + AYGQSK A++L Sbjct: 1 MDLTGRRAVVTGGASGLGAETVRALAAAGAEVTVATRRPLSAEPLVQELAAAGGAGRVTAEALDLSDPASVESFARAWRG---PLDILVANAGIMALPTRTLAPNGWEMQLATNYLGHFALA-----TGLHAALRDAGSARIVVVSSGAHLDA-----PFDFEDAHFARRPYDPWVAYGQSKAADVL 174
BLAST of DR908772 vs. ExPASy Swiss-Prot
Match: OXIR_STRLI (Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 72/190 (37.89%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 31 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF-MLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA---YNSFGAYGQSKLANIL 579 +D TG A+VTG +SG+G ET R LA G V +A R+ + E +V+E +A +V A LD+S +ASV FA + PL+IL+ NAGIMA P L+ E+Q ATN T A + + RIV VSS AH G FD + A Y+ + AYG SK A++L Sbjct: 1 MDLTGRRAVVTGGASGLGAETVRALAAAGAEVTIATRHPQSA----EPLVQEAAAAGAGRVHAEALDLSDVASVDSFARAWRG---PLDILVANAGIMALPTRTLTPYGWEMQLATNYLGHFALA-----TGLHAALRDAGSARIVVVSSGAHL-----GTPFDFEDPHFARRPYDPWAAYGNSKTADVL 173 The following BLAST results are available for this feature:
BLAST of DR908772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908772 ID=DR908772; Name=DR908772; organism=Citrus sinensis; type=EST; length=582bpback to top |