DR908770

Overview
NameDR908770
Unique NameDR908770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_GEOKA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus kaustophilus GN=gpmI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++L G   P +
Sbjct:  405 VGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_BACSU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus subtilis GN=gpmI PE=1 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++   +SGEP          T+HT  PVP+ +   G+       T    G L ++A T ++L G E P +
Sbjct:  405 VGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADILI--TESGEP---------HTAHTTNPVPVIVTKEGI-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++L G   P +
Sbjct:  405 VGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_BACHK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus thuringiensis subsp. konkukian GN=gpmI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G +E T+ A +A DE +  +++AI    G+ L+TADHGNA++  +    GEP         +T+HT  PVP  +      +DV+ R D   G L ++A T + L G E P +
Sbjct:  404 VGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADE--ELTSEGEP---------MTAHTTNPVPFIV----TKNDVELRED---GILGDIAPTMLTLLGVEQPKE 501          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_BACCZ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus (strain ZK / E33L) GN=gpmI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G +E T+ A +A DE +  +++AI    G+ L+TADHGNA++  +    GEP         +T+HT  PVP  +      +DV+ R D   G L ++A T + L G E P +
Sbjct:  404 VGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADE--ELTSEGEP---------MTAHTTNPVPFIV----TKNDVELRED---GILGDIAPTMLTLLGVEQPKE 501          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_BACCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gpmI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G +E T+ A +A DE +  +++AI    G+ L+TADHGNA++  +    GEP         +T+HT  PVP  +      +DV+ R D   G L ++A T + L G E P +
Sbjct:  404 VGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADE--ELTSEGEP---------MTAHTTNPVPFIV----TKNDVELRED---GILGDIAPTMLTLLGVEQPKE 501          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_BACAN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus anthracis GN=gpmI PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.550e-11
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G +E T+ A +A DE +  +++AI    G+ L+TADHGNA++  +    GEP         +T+HT  PVP  +      +DV+ R D   G L ++A T + L G E P +
Sbjct:  404 VGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADE--ELTSEGEP---------MTAHTTNPVPFIV----TKNDVELRED---GILGDIAPTMLTLLGVEQPKE 501          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_THEEB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thermosynechococcus elongatus (strain BP-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.025e-11
Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINL 325
            VGHTG + AT+ A +  D  V ++++A  KVGG  L+TADHGNAE M+          +DGN    T+HT  PVP I + G     PG    V  R D   G LA++A T + +
Sbjct:  399 VGHTGKLAATIQAIETVDRCVGVLVEAATKVGGTLLITADHGNAEYMID---------EDGN--PWTAHTTNPVPFILVEGEKRKVPGHGGHVILRKD---GCLADIAPTILEI 498          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_PSEHT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gpmI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.025e-11
Identity = 44/116 (37.93%), Postives = 60/116 (51.72%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 349
            VGH+G   A V AC+A D  +  ++ A+ K GG  L+TADHGNAE M          LK G  Q  T+HT +PVP    G       +  T      L++VA T ++L G E P++
Sbjct:  406 VGHSGVFAAAVKACEAVDHCIGRVVAALNKYGGEALITADHGNAEQMAN--------LKTG--QAHTAHTSEPVPFIYVG-------RDATASEGKALSDVAPTMLHLMGMEQPTE 504          
BLAST of DR908770 vs. ExPASy Swiss-Prot
Match: GPMI_MICAN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Microcystis aeruginosa (strain NIES-843) GN=gpmI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.025e-11
Identity = 46/120 (38.33%), Postives = 65/120 (54.17%), Query Frame = 2
Query:    2 VGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 343
            VGHTG ++A + A +  D  +  ++ ++ K+GG  L+TADHGNAE MV  ++SG P          T+HT  PVP I I G     PG   DV+ R D   G LA++A T + +     P
Sbjct:  400 VGHTGILDAAMKAVETVDLCLAKLLSSVNKLGGTVLITADHGNAETMV--DESGNP---------WTAHTTNPVPLILIEGEGRKIPGHGGDVQLRDD---GRLADIAPTILEILSIPVP 505          
The following BLAST results are available for this feature:
BLAST of DR908770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
GPMI_GEOKA1.550e-1137.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSU1.550e-1136.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACST1.550e-1137.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACHK1.550e-1136.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACCZ1.550e-1136.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACCR1.550e-1136.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACAN1.550e-1136.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THEEB2.025e-1140.352,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEHT2.025e-1137.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MICAN2.025e-1138.332,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16898 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-39_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908770 ID=DR908770; Name=DR908770; organism=Citrus sinensis; type=EST; length=583bp
GGTGGGGCACACGGGAGATATTGAGGCAACAGTGGTGGCATGCAAGGCTG
CTGATGAAGCTGTCAAGATAATCATTGATGCAATAGAGAAAGTTGGTGGA
ATATATCTTGTTACTGCAGATCATGGCAATGCTGAGGACATGGTCAAGAG
GAACAAATCTGGGGAGCCTCTTCTTAAGGATGGCAATATTCAAGTGCTCA
CGTCTCACACTCTTAAACCCGTTCCCATTGCAATCGGAGGTCCTGGACTG
CCAGATGATGTCAAGTTCCGCACAGATCTCCCTAATGGTGGGCTGGCCAA
TGTAGCAGCAACTTTTATCAATCTCCATGGATATGAGGCGCCTAGTGACT
ACGAGCCAAGTCTTATTGAAGTAACTGACGACTGAGAAGTAACTGACGAC
TGGGCGAACAATGGATCGTCGCCTAGATTTTATAACTCCGGAGGAATTCC
GTTAAAACGTAAAACAATAAATTGAATTTTGGGGTCTTGAATTCATTTTG
ATACGCGTGCTGTTTTTCAGCTTACATTTCGATTGCTGTCTGTTGGAGGC
AGACAGAACAATATAGCTCAAAATTTATTTTTG
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