DR908765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49 Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1 Query: 7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570 LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A Sbjct: 223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49 Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1 Query: 7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570 LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A Sbjct: 223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49 Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1 Query: 7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570 LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A Sbjct: 223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKQGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49 Identity = 93/192 (48.44%), Postives = 125/192 (65.10%), Query Frame = 1 Query: 7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAEN 576 L+DL+ N + IHVD ASG PF+ P LEWDFRLP V SIN SGHKYGLVY GVGW++WR K+ LP+ELVF ++YLG PT +NFS+ +SQII QYY F+R G+EGY+ I A L + + +TG FEI + +P+V + LKD + A T++++++ L+ GW VPAY +P N Sbjct: 220 LNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHKYGLVYPGVGWILWRDKEYLPEELVFDVSYLGGHMPTMAINFSRSASQIIGQYYNFLRFGYEGYRQIHMRTRDGALQLSQAVAETGLFEIYNDGANLPIVCYKLKDDANVAWTLYDLADRLQMKGWQVPAYPLPKEMGN 411
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49 Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1 Query: 7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570 LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A Sbjct: 223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.434e-49 Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1 Query: 7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570 LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LKD +T++++SE LR GW VPA+T+ A Sbjct: 223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.173e-49 Identity = 94/193 (48.70%), Postives = 128/193 (66.32%), Query Frame = 1 Query: 7 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL---SKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANA 570 LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +E + D G+P V F LK+ +T++++SE LR GW VPA+T+ A Sbjct: 223 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKEGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA 415
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.342e-47 Identity = 90/190 (47.37%), Postives = 123/190 (64.74%), Query Frame = 1 Query: 4 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD--SSAHTVFEISEGLRKFGWIVPAYTMPAN 567 LL + + NE IH+D ASG PF+ P+L WDFRL V SIN SGHKYGLVY GVGW++W+ K+ LP EL+F ++YLG PT +NFS+ +SQII QYY F+R GFEGY+ I E A L + +EK+G FEI++ +P+V + LKD T++++++ L GW VPAY +PA+ Sbjct: 224 LLDEKVEAYNEANEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSGHKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFLRYGFEGYREIHEKTKKTALYLSKTVEKSGYFEIINDGSNLPIVCYKLKDDLDVEWTLYDLADQLLMKGWQVPAYPLPAD 413
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.906e-47 Identity = 91/190 (47.89%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG-VPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMP 561 K + + L K +ETG D PIHVDAASGGF+APFL P++ WDFRLP VKSIN SGHK+GL GVGWVVWR K+D+ +LVF +NYLG + PTF+LNFS+ QI+ QYY F+R G GY + + C+ + + + ++K G F+I+ G +P + LK + +F++S+ +R GW + +YT+P Sbjct: 219 KGISEALDKFEKETGLDIPIHVDAASGGFVAPFLQPEIVWDFRLPRVKSINGSGHKFGLSPLGVGWVVWRGKNDIHKDLVFDVNYLGGNMPTFSLNFSRPGGQIVCQYYNFLRHGRSGYTAVHQACLDHGIFISKQVKKHGIFDIVYDGTGALPGACWKLKKDAKVKFNLFDLSDRMRNRGWQIASYTLP 408
BLAST of DR908765 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.906e-47 Identity = 88/191 (46.07%), Postives = 124/191 (64.92%), Query Frame = 1 Query: 1 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD--SSAHTVFEISEGLRKFGWIVPAYTMPAN 567 +LL + + NE IH+D ASG PF+ P+L WDFRL V SIN SGHKYGLVY GVGW++W+ K+ LP EL+F ++YLG PT +NFS+ +SQII QYY F+R GFEGY+ I E A L + +EK+G FEI++ +P+V + +K+ T++++++ L GW VPAY +PA+ Sbjct: 223 QLLDEKVEAYNETNEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSGHKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFLRYGFEGYREIHEKTKKTAIYLAKTVEKSGYFEIINDGANLPIVCYKMKEGLDVEWTLYDLADQLLMKGWQVPAYPLPAD 413 The following BLAST results are available for this feature:
BLAST of DR908765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908765 ID=DR908765; Name=DR908765; organism=Citrus sinensis; type=EST; length=583bpback to top |