CN189515

Overview
NameCN189515
Unique NameCN189515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_BOMMO (Eukaryotic translation initiation factor 3 subunit I OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35
Identity = 77/199 (38.69%), Postives = 114/199 (57.29%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES-VLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            M+P++++GH+R +T +KYN +GDLLFS AKD  P VW++ NGERLGT+ GH G +WC DV   S+ LITG  D + +LW++ETG  + T   +S  R+ +F+     A  TTD  M     + V          SG++ +L  +    ++   +WG L+ TII+  E   +  WD  TGK +  S KE  H+ T   L+
Sbjct:    1 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKI-HSVKEHTHQITDMQLS 198          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_RAT (Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus GN=Eif3i PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 72/181 (39.78%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            M+PIL++GHER +T +KYN +GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       S E  + +     +I  AVWGPL   II+  E   +  +  ++G++L
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDSNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVL 181          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_RABIT (Eukaryotic translation initiation factor 3 subunit I OS=Oryctolagus cuniculus GN=EIF3I PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 72/181 (39.78%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            MRPIL++GHER +T +KYN +GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       + E  + +     +I  AVWGPL   II+  E   +  +  ++G++L
Sbjct:    1 MRPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVL 181          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_NEUCR (Eukaryotic translation initiation factor 3 subunit I OS=Neurospora crassa GN=tif-34 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            MRPIL+ GHER LT +KYN DGDLLFS +KD    VWFA NGERLGTY GH GA+W  DV   S  L +GSAD T +LW ++TG  L T++F +  + V+F+  G KL  +T      L + + +       A+QS E  + +     +   A W  L++ II+  ED  V  +D + G LL
Sbjct:    1 MRPILLSGHERALTQIKYNRDGDLLFSVSKDQQICVWFAHNGERLGTYHGHQGAIWTIDVDPTSTILASGSADNTIRLWEIKTGRLLKTWDFPTAVKRVEFSEDGSKLLGVTEKRMGHLGTIVVLDIKLDVDAEQSDEKAMTIVCEDSKATVAGWSYLSKYIIAGHEDGSVSQFDGKNGDLL 182          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ANOGA (Eukaryotic translation initiation factor 3 subunit I OS=Anopheles gambiae GN=AGAP006607 PE=3 SV=4)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 77/200 (38.50%), Postives = 116/200 (58.00%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAG-DPADQSGESV--LILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            M+P++++GH+R +T +KYN +GDL+FS AKD  P+VW++ NGERLGT+ GH GAVWC DV   +  LITG+ D    LW+VETG  L     +S  R+ +F+     A  +TD  M     + V  +   D +  S + V  L +   Q +I   +WG L+ T+I+  E+  +RIWD    + +KE +    H  +IT +
Sbjct:    1 MKPLMLQGHQRAITQIKYNREGDLIFSSAKDSKPSVWYSLNGERLGTFNGHIGAVWCVDVDWTTTRLITGAGDMNTFLWDVETGTALGKIPCNSSVRTCNFSFSGNQASYSTDRAMNHPCELFVIDVRNIDASISSADPVLKLTMNEQQSKITSMLWGALDETVITGHENGSLRIWDL---RAVKELNSVNDHTASITDM 197          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_MOUSE (Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus GN=Eif3i PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34
Identity = 71/181 (39.23%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            M+PIL++GHER +T +KYN +GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       S E  + +     +I  AVWGPL   +I+  E   +  +  ++G++L
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDSNEPYMKIPCNDSKITSAVWGPLGECVIAGHESGELNQYSAKSGEVL 181          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DROWI (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila willistoni GN=Trip1 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34
Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 3
Query:  108 LMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES-VLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            +++GHER +T +KYN +GDLLFS +KD  P VW++ NGERLGTY GH GAVWC DV  +S  LIT   D TAKLW+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +    +  S ++  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  K  D  T H   I  +
Sbjct:    1 MLQGHERSITQIKYNREGDLLFSSSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITAGGDMTAKLWDVEYGTVIASIPTKSSVRTCNFSFSGNQAAYSTDKTMGQSCELFIIDVRNADSTLSEQTPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDVRKGQ--KVVDSGTDHTGVINDM 192          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_BOVIN (Eukaryotic translation initiation factor 3 subunit I OS=Bos taurus GN=EIF3I PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34
Identity = 72/181 (39.78%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            M+PIL++GHER +T +KYN +GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       S E  + +     +I  AVWGPL   II+  E   +  +  ++G++L
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDSNEPYMRIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAKSGEVL 181          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_TAEGU (Eukaryotic translation initiation factor 3 subunit I OS=Taeniopygia guttata GN=EIF3I PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.383e-34
Identity = 72/188 (38.30%), Postives = 106/188 (56.38%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKET 659
            M+PIL++GHER +T +KYN +GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL      S  R+  F  G  + + +TD  M     +    +      ++ E  + +     +I  AVWGPL   II+  E+  +  +  ++G+ L    + T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVDADWDTRHVLTGSADNSCRLWDCETGKQLALVKTSSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIENNEPYMKIPCSDSKITSAVWGPLGEFIIAGHENGELNQFSAKSGEQLSNIKEHT 188          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_PONAB (Eukaryotic translation initiation factor 3 subunit I OS=Pongo abelii GN=EIF3I PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 71/181 (39.23%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            M+PIL++GHER +T +KYN +GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       + E  + +     +I  AVWGPL   II+  E   +  +  ++G++L
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGSIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVL 181          
The following BLAST results are available for this feature:
BLAST of CN189515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EIF3I_BOMMO4.753e-3538.69Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_RAT8.108e-3539.78Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_RABIT8.108e-3539.78Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_NEUCR8.108e-3543.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ANOGA8.108e-3538.50Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_MOUSE1.059e-3439.23Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROWI1.059e-3438.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_BOVIN1.059e-3439.78Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_TAEGU1.383e-3438.30Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_PONAB1.806e-3439.23Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189515 ID=CN189515; Name=CN189515; organism=Citrus sinensis; type=EST; length=689bp
AGGCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCGGAAACTCCATTCG
TCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAAAAGCAAGCATGAG
ACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACA
ACGAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGATCACACACCCACC
GTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCTACCGCGGCCACAA
CGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCGATGACGCTAATAA
CCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGTTGAAACAGGGGCT
CAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTCGACTTTGC
TGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAA
ACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCCTGCTGATCAGAGT
GGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAAGAATAAACAGAGC
AGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCTGGAGAAGATGCTA
TAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCTTAAAGAGTCGGAC
AAGGAAACTGGTCATAAAAAGACTATAACATCGCTTGCA
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