CN189515

Overview
NameCN189515
Unique NameCN189515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPTN (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif34 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32
Identity = 76/184 (41.30%), Postives = 107/184 (58.15%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDP--ADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            MRPIL+ GHER LT +K+N DGDLLFS +KD     W+  NGERLGTY GH GAVW  DVS +++ L TGSAD + +LWNV+TG  +  + F +  + V+F+      +  T+  M    AI V  I+ +    +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG  L+
Sbjct:    1 MRPILLSGHERSLTQIKFNRDGDLLFSVSKDKIVCAWWTANGERLGTYNGHLGAVWTVDVSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPTAVKRVEFSPDGSQLLAVTEKRMGFLGAISVLDISYEDNFQNQADEPSLRITCNESKATVAGWSYLGKYIIAGHEDGSVSQYDAKTGDQLE 184          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_YARLI (Eukaryotic translation initiation factor 3 subunit I OS=Yarrowia lipolytica GN=TIF34 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32
Identity = 73/184 (39.67%), Postives = 110/184 (59.78%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGD-PADQSGESVLILKGPQG--RINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            MRPIL++GHERPLT LKYN +GDLLFS A+D T  VW++ NGERLGT  G  GA +  D    +  + TGSADQTA+LW+++TG  + ++NF +  + V+F+      ++ ++  M     I V  +  D  A Q  E ++ +K  +G  + + AVW    + II+A  D  +  +D  TG+ +
Sbjct:    1 MRPILLQGHERPLTQLKYNREGDLLFSVARDKTICVWYSHNGERLGTLEGSGGANFSVDADPTTTIVATGSADQTARLWDIKTGKTIHSWNFKTTVKRVEFSPDGTKLIVLSEKMMGYPGGISVFNVKADVNATQETEPIMDIKPEEGADKFSFAVWSYGGKYIITAHADGSLSKYDGATGEFI 184          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_NEOFI (Eukaryotic translation initiation factor 3 subunit I OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif34 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32
Identity = 76/188 (40.43%), Postives = 107/188 (56.91%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA------GDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            MRPIL+ GHER L  +K+N DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V+F       +  T+  M     I V  I+      G   +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L+
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVEFNPDGSRLLAVTEKRMGFLGTIAVLDISYGDSQGGALENQADEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQLE 188          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_VANPO (Eukaryotic translation initiation factor 3 subunit I OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF34 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 68/195 (34.87%), Postives = 111/195 (56.92%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQS-----GESVLILKGPQGR--INRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKET 659
            MRPI++ GHERPLT +KYN++GDL+FSC+KD   +VW++ NGERLGT  GH G +W  DV   + + +TGSAD + K+W V+TG  + T+    P + V+F+      +   D  M    +I+V +++ DP  +       E +L++   +    +  A W    + II+  +D  V  ++ +TG+ +   +  T
Sbjct:    1 MRPIMLVGHERPLTQVKYNKEGDLVFSCSKDSVASVWYSINGERLGTLEGHTGTIWSIDVDPFTESCVTGSADYSIKVWKVQTGTVIHTWTAPVPIKRVEFSPCGDYILAVLDDVMRYPGSINVYKVSRDPVTKEIKEFVEEPILVINTQENHKGVTVAGWSAEGKYIIACHKDGKVSKYNAKTGEFITSIELHT 195          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_PICST (Eukaryotic translation initiation factor 3 subunit I OS=Pichia stipitis GN=TIF34 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 78/202 (38.61%), Postives = 106/202 (52.48%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDP---ADQSGESVLILKGPQ--GRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGH--KKTIT 680
            MRPI + GHER LT +KYN +GDLLFS AKD+  ++W++ NGERLGT  GH G +W  DV  D+    TG  D   KLW VETG  +FT+   SP R V F+      +   D  M     I V  I  D     +QS E  L+++ PQ   +   A W      IIS  +D  +  +D +TG+ +   +    H  +K +T
Sbjct:    1 MRPIKLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSIDVDPDTHLCATGGGDLAIKLWKVETGKCVFTWESPSPVRRVAFSPDGSRLLAIADQVMGHIGTIVVYEINHDDESLTNQSTEPSLVIETPQDGAKATVAGWSANGEFIISGHDDGYIYKYDAQTGEAVNSLEAHGIHTEEKNVT 202          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DEBHA (Eukaryotic translation initiation factor 3 subunit I OS=Debaryomyces hansenii GN=TIF34 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 74/196 (37.76%), Postives = 108/196 (55.10%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI--AGDPADQSGESVLIL--KGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKK 671
            MRPI + GHER LT +K+N +GDL+FS AKD T ++W++ NGERLGT  GH G +W  DV  D++   TGSAD T KLW +ETG  + ++   +P R V F+  +K  +  TD  M     I V  I   GD   Q  +  LI+  +    ++  A W      II+  ED  V  +++ TG+ ++ +     H +
Sbjct:    1 MRPIKLMGHERSLTQVKFNREGDLIFSVAKDSTASIWYSSNGERLGTLEGHIGTIWSIDVDADTILCATGSADLTIKLWKIETGECVQSWEMPTPVRRVAFSPDNKRLLAVTDQVMGQTGTISVFDINYEGDYTKQQSKPSLIIETRSDAKKVTVAGWSANGDFIIAGHEDGYVSKYNSSTGEFIETAQVHGIHNE 196          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPFU (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus fumigatus GN=tif34 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31
Identity = 76/188 (40.43%), Postives = 105/188 (55.85%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI------AGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            MRPIL+ GHER L  +K+N DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V F       +  T+  M     I V  I       G   +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L+
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVAFNPDGSRLLAVTEKRMGFLGTIAVLDINYGDSQGGGLENQADEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQLE 188          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPFC (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=tif34 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31
Identity = 76/188 (40.43%), Postives = 105/188 (55.85%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI------AGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            MRPIL+ GHER L  +K+N DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V F       +  T+  M     I V  I       G   +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L+
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVAFNPDGSRLLAVTEKRMGFLGTIAVLDINYGDSQGGGLENQADEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQLE 188          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_COCIM (Eukaryotic translation initiation factor 3 subunit I OS=Coccidioides immitis GN=TIF34 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPA-----DQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            MRPIL++GHER L  +++N DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS  ++ L TG+AD T +LWN ++G  +  ++F +  + V+F+  G +L  +T      L + +      GD       DQ+ E  L +   Q +   A W  L + II+  ED  V  +D++TG+ L+
Sbjct:    1 MRPILLQGHERSLNQIRFNHDGDLLFSVAKDKILCAWYSANGERLGTYHGHQGALWTVDVSPGTVLLATGAADNTVRLWNAKSGECVKVWDFPTAVKRVEFSPDGSRLLAVTEKRMGYLGTIVVFDVRYGDGEGNNLDDQTDEPSLKITCEQSKATVAGWSFLGKYIIAGHEDGSVSQYDSKTGEQLQ 188          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPCL (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus clavatus GN=tif34 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.188e-31
Identity = 75/188 (39.89%), Postives = 106/188 (56.38%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI------AGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            MRPIL+ GHER L  +K+N DGDLLFS +KD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V F+      +  T+  M     I V  I        D  +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L+
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVSKDKVVCAWWSANGERLGTYTGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVAFSPDGSKLLAVTEKRMGFLGTIAVFDINYGNGQGEDLENQAEEPSLRITCSESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQLE 188          
The following BLAST results are available for this feature:
BLAST of CN189515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EIF3I_ASPTN2.884e-3241.30Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_YARLI3.766e-3239.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_NEOFI6.425e-3240.43Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_VANPO8.391e-3234.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_PICST8.391e-3238.61Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DEBHA8.391e-3237.76Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPFU1.869e-3140.43Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPFC1.869e-3140.43Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_COCIM2.441e-3139.36Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPCL3.188e-3139.89Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189515 ID=CN189515; Name=CN189515; organism=Citrus sinensis; type=EST; length=689bp
AGGCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCGGAAACTCCATTCG
TCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAAAAGCAAGCATGAG
ACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACA
ACGAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGATCACACACCCACC
GTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCTACCGCGGCCACAA
CGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCGATGACGCTAATAA
CCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGTTGAAACAGGGGCT
CAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTCGACTTTGC
TGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAA
ACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCCTGCTGATCAGAGT
GGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAAGAATAAACAGAGC
AGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCTGGAGAAGATGCTA
TAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCTTAAAGAGTCGGAC
AAGGAAACTGGTCATAAAAAGACTATAACATCGCTTGCA
back to top