CN189515

Overview
NameCN189515
Unique NameCN189515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_CANGA (Eukaryotic translation initiation factor 3 subunit I OS=Candida glabrata GN=TIF34 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.582e-30
Identity = 72/205 (35.12%), Postives = 116/205 (56.59%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDP--------ADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRPI++ GHERPLT +KYN +GDLLF+C+KD + +VW+++NGERLGT  GH G++W  D    S+  +TGSAD T K+W +  G  + T+N   P + V+F+   K  +   D  M+   +I +  +  +P         ++   S++  +G     + A W    + II+  +D  +  +DT+ G  L ES +   HK +++ L
Sbjct:    1 MRPIVLMGHERPLTQVKYNREGDLLFTCSKDISASVWYSNNGERLGTLDGHMGSIWSIDSDHTSLYCVTGSADYTIKVWTLMNGQCVQTWNCPVPVKRVEFSPCGKYILAILDNVMKKPGSIEIYEVKRNPETNEITEFVEEPIHSIVTHEGLDA-ASVAGWSGEGKYIIAGHKDGKISKYDTQDGYKLVESQQV--HKDSVSDL 202          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_CAEBR (Eukaryotic translation initiation factor 3 subunit I OS=Caenorhabditis briggsae GN=eif-3.I PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.699e-30
Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGES 509
            MRP+ +KGHER LT +++N +GDL FSCAKD  P VW+ +NGER+G+Y GHNGAVW  DVS D+   +T S D T K+W+ E G+ ++T N  +P +S  F+    L   TT    +  S + V+ +  G+   +  ES
Sbjct:    1 MRPLSLKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDVSWDTSKCVTASGDLTVKIWDAELGSCIYTINHQTPMKSCGFSYSGNLVCYTTQKMTKNLSTVQVRDLRDGNQMAEGAES 139          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_CAEEL (Eukaryotic translation initiation factor 3 subunit I OS=Caenorhabditis elegans GN=eif-3.I PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVK 470
            MRP+ +KGHER LT +++N +GDL FSCAKD  P VW+ +NGER+G+Y GHNGAVW  DVS D+   +T S D T K+W+ E G  L+T N  +P +S  F+    L   TT    +  S   V+
Sbjct:    1 MRPLSLKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDVSWDTTKCVTASGDLTVKIWDAELGNCLYTINHQTPMKSCGFSYSGNLVCFTTQKMTKNLSTFQVR 125          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_CANAL (Eukaryotic translation initiation factor 3 subunit I OS=Candida albicans GN=TIF34 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 72/186 (38.71%), Postives = 99/186 (53.23%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPA---DQSGESVLIL--KGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638
            MRPI + GHER LT +KYN +GDLLFS AKD+  ++W++ NGERLGT  GH G +W  DV  ++    TG  D   KLW VE G  ++T++  SP R V F+   K  +   D  M     + V  I  D A    Q  E  L++  K    +   A W      II   ++  V  +D++TGKL+
Sbjct:    1 MRPIKLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSIDVDPETHLCATGGGDLAIKLWKVENGQCVYTWDSPSPVRRVAFSPDGKKLLAIADQVMGHIGTVSVFDINDDDATLSQQKAEPSLVIETKSEGSKATVAGWSGDGDYIIVGHDNGYVSKYDSKTGKLV 186          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_BRUMA (Eukaryotic translation initiation factor 3 subunit I OS=Brugia malayi GN=Bm1_48300 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29
Identity = 73/198 (36.87%), Postives = 105/198 (53.03%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES-VLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            M+P+ +KGH+R LT ++ N DGDLLFS  KD +P VW+ +NGER+GTY GHNG +W  DVS D+    + S D   KLWN ETG  + + +  + ARS+  +    L   TT    +  +++ V  I  D +  SGE+     K  Q + N  VW  L+ T+    E   V  +D   G  +   + E  HK  I  +
Sbjct:    1 MKPLSLKGHDRALTRVRINRDGDLLFSAGKDKSPCVWYMENGERIGTYDGHNGVIWDIDVSWDTRHFCSASGDVFVKLWNCETGDVINSVSTPTAARSISLSYSGNLIAFTTIKMTQNVASLFVYDIR-DGSQMSGENQPTFRKSLQTQANSCVWTHLDDTVCVGNEKGNVHQYDIRKGDDIVNFNDE-AHKFQINDM 196          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPNC (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif34 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.134e-28
Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDF----------AVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            MRPIL+ GHER L  +K+N DGDL+FS AKD     W++ NGERLGTY GH GA+W  DVS ++  L TGSAD T +LWNV+TG  +  ++F +  + V                ++  + T   +++N   ++        +Q+ E  L +   + +   A W  + + II+  ED  V  +D +TG+ L+
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLIFSVAKDKIVCAWWSANGERLGTYNGHQGAIWTVDVSPNTQILATGSADNTVRLWNVKTGECIKVWDFPTAVKRVRVHPPMEADCWPVTEKRMGFLGTIAVLDINYGENL-------TEQAEEPSLRITCTESKATVAGWSYMGKYIIAGHEDGSVSQYDGKTGEQLE 185          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_CRYNE (Eukaryotic translation initiation factor 3 subunit I OS=Cryptococcus neoformans GN=TIF34 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.934e-28
Identity = 69/194 (35.57%), Postives = 104/194 (53.61%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTY------RGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI-AGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKE 656
            M+PI+++GHER L  + +N +GDLLFS +KD     W+  NGERLGTY       GHNG+VW   V   +  L+TG AD   KLW V+TG  L+T+ F +  + V +   D + +  T+      S I +  I   DP  QS   +  ++    R   A+W PL+  II+  E   +  +D +TG+ ++  + E
Sbjct:    1 MKPIILQGHERSLNQIVFNSEGDLLFSASKDSVVNAWYTSNGERLGTYGGIKGGDGHNGSVWTVAVDSQTRFLLTGGADNAMKLWEVKTGECLYTWEFLTAVKRVAWNEDDDMFLSITEQRSGQPSVIRIFSINREDPRSQSTTPITEMRLSGSRATVAIWAPLSDYIITGHESGKIAKYDVKTGEEVQAVEDE 194          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ASHGO (Eukaryotic translation initiation factor 3 subunit I OS=Ashbya gossypii GN=TIF34 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28
Identity = 73/204 (35.78%), Postives = 116/204 (56.86%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQ-----SGESVLIL-KGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRPI++ GHER LT +KYN +GDL+F+  KD+  +VW+A NGERLGT  GHNG++W  DV + +   +TGSAD + K+W V  G+   +++  +P R V+F+  GD++  +  D  M    AI V  +  D  +Q     SG S  IL +     +  A W    + I++  +D  +  ++  TG+ L+  D    HK+ ++ +
Sbjct:    1 MRPIMLMGHERSLTQVKYNREGDLIFTSGKDNVASVWYAMNGERLGTLEGHNGSIWSIDVDQHTEYAVTGSADFSVKVWRVRDGSIAHSWDTRTPVRRVEFSPTGDRVLAV-LDNVMNYAGAIVVFSVTRDANNQITGFNSGLSCEILTQEGCAPVLVASWSYDGKYIVAGHQDGKISKYNGVTGECLEIKDL---HKQRVSDI 200          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_KLULA (Eukaryotic translation initiation factor 3 subunit I OS=Kluyveromyces lactis GN=TIF34 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27
Identity = 70/207 (33.82%), Postives = 110/207 (53.14%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINR---------AVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRPI++KGHERPLT +K+N DGDL+F+C+KD   ++W+A NGERLGT   H+G +W  DV   +   +TG AD   K+W V TG  + + +  SP   V+F+  G KL ++       + S +    I     +++GE V + + P   I           A W    + II+  ED  +  +  E G+ ++    +  H+K+I  +
Sbjct:    1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLI----RNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQ---AKKIHEKSIKDI 200          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_YEAST (Eukaryotic translation initiation factor 3 subunit I OS=Saccharomyces cerevisiae GN=TIF34 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 67/188 (35.64%), Postives = 100/188 (53.19%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGED-AIVRIWDTETGKLLKESDKE 656
            M+ I + GHERPLT +KYN++GDLLFSC+KD + +VW++ NGERLGT  GH G +W  DV   +   +TGSAD + KLW+V  G  + T+    P + V+F+      +   D  M+   +I++  I  D A                + +    P+++ I   G D A V  W T+ GK +    K+
Sbjct:    1 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH-------------ELTKVSEEPIHKIITHEGLDAATVAGWSTK-GKYIIAGHKD 174          
The following BLAST results are available for this feature:
BLAST of CN189515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EIF3I_CANGA1.582e-3035.12Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CAEBR2.699e-3043.88Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CAEEL7.853e-3047.20Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CANAL2.285e-2938.71Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_BRUMA5.090e-2936.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPNC1.134e-2835.94Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CRYNE1.934e-2835.57Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASHGO9.600e-2835.78Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_KLULA1.638e-2733.82Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_YEAST1.533e-2535.64Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189515 ID=CN189515; Name=CN189515; organism=Citrus sinensis; type=EST; length=689bp
AGGCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCGGAAACTCCATTCG
TCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAAAAGCAAGCATGAG
ACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACA
ACGAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGATCACACACCCACC
GTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCTACCGCGGCCACAA
CGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCGATGACGCTAATAA
CCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGTTGAAACAGGGGCT
CAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTCGACTTTGC
TGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAA
ACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCCTGCTGATCAGAGT
GGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAAGAATAAACAGAGC
AGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCTGGAGAAGATGCTA
TAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCTTAAAGAGTCGGAC
AAGGAAACTGGTCATAAAAAGACTATAACATCGCTTGCA
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