CN189515

Overview
NameCN189515
Unique NameCN189515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_YEAS7 (Eukaryotic translation initiation factor 3 subunit I OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF34 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 67/188 (35.64%), Postives = 100/188 (53.19%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGED-AIVRIWDTETGKLLKESDKE 656
            M+ I + GHERPLT +KYN++GDLLFSC+KD + +VW++ NGERLGT  GH G +W  DV   +   +TGSAD + KLW+V  G  + T+    P + V+F+      +   D  M+   +I++  I  D A                + +    P+++ I   G D A V  W T+ GK +    K+
Sbjct:    1 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH-------------ELTKVSEEPIHKIITHEGLDAATVAGWSTK-GKYIIAGHKD 174          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: STRAP_DICDI (Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum GN=strap PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18
Identity = 52/181 (28.73%), Postives = 88/181 (48.62%), Query Frame = 3
Query:   99 RPILMKGHERPLTYLKY---NEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTII-SAGEDAIVRIWDTETG 629
            +P++  GH RP++ L +   N DG  + S   D +P +   +NG+ +GT+ GH GAVW    +  +   +T SAD T KLW+   G+++ +    S  ++ DF+  +   V           +  + RI     ++  + +L + G    I  A W   N  I+ S G D ++RIWD  +G
Sbjct:    3 QPLICSGHSRPVSDLSFSNENSDGSFIVSACLDGSPMLRNGENGDWIGTFEGHKGAVWSSRFNSTASQALTASADYTVKLWDTLNGSEILSIEHQSIVKTADFSNNNSRVV--------TGGSEKILRIF--DLERPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSG 173          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: STRAP_CHICK (Serine-threonine kinase receptor-associated protein OS=Gallus gallus GN=STRAP PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15
Identity = 53/178 (29.78%), Postives = 85/178 (47.75%), Query Frame = 3
Query:  102 PILMKGHERPLTYLKYN---EDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTET 626
            P+   GH RP+  L ++     G  L S  KD  P +   D G+ +GT+ GH GAVW   +++D+    T +AD TAK+W+  +G +L T       +SVDF        + T    +L     + +   +P         ++ G    I +A+W   ++ I+SA +D  VR+WD  T
Sbjct:    7 PLTCSGHTRPVVDLAFSGVTPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELITLAHKHIVKSVDFTQDSN--YLLTGGQDKLLRIYDLSKPEAEPD--------VVSGHTSGIKKALWSSDDKQILSA-DDKTVRLWDRST 173          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR69_HUMAN (WD repeat-containing protein 69 OS=Homo sapiens GN=WDR69 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 55/195 (28.21%), Postives = 86/195 (44.10%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETG--AQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            ++GH   +  L +N  GD + + + DHT  VW AD G ++    GH   +     + D   ++TGS D+T KLW+   G      T + D    S     G  +A  + D    + SA   K IA             L+G +G I++  + P    +++   D   RIWD +TG+ L+  +   GH   I S A
Sbjct:  215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAK------------LEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLE---GHTDEIFSCA 394          

HSP 2 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 49/176 (27.84%), Postives = 77/176 (43.75%), Query Frame = 3
Query:  108 LMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRD-SMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGK 632
            ++K H  PLT +  N+ G    + + D T  +W   +GE L T  GH   V+    +      + TGS D+T KLW+VETG    TF   +           ++  ++ +P   L +   +   A     Q+GE V  L+G    I    +      II+   D  V +WD +TG+
Sbjct:   87 VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTA----------EIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGR 252          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: STRAP_RAT (Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus GN=Strap PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 53/178 (29.78%), Postives = 86/178 (48.31%), Query Frame = 3
Query:  102 PILMKGHERPLTYLKYN---EDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTET 626
            P+   GH RP+  L ++     G  L S  KD  P +   D G+ +GT+ GH GAVW   +++D+    T +AD TAK+W+  +G +L T       ++VDF        + T    +L     + +   +P + SG +          I +A+W   ++ I+SA +D  VR+WD  T
Sbjct:    7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSN--YLLTGGQDKLLRIYDLNKPEAEPKEISGHT--------SGIKKALWCSEDKQILSA-DDKTVRLWDHAT 173          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: STRAP_HUMAN (Serine-threonine kinase receptor-associated protein OS=Homo sapiens GN=STRAP PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 53/178 (29.78%), Postives = 86/178 (48.31%), Query Frame = 3
Query:  102 PILMKGHERPLTYLKYN---EDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTET 626
            P+   GH RP+  L ++     G  L S  KD  P +   D G+ +GT+ GH GAVW   +++D+    T +AD TAK+W+  +G +L T       ++VDF        + T    +L     + +   +P + SG +          I +A+W   ++ I+SA +D  VR+WD  T
Sbjct:    7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSN--YLLTGGQDKLLRIYDLNKPEAEPKEISGHT--------SGIKKALWCSEDKQILSA-DDKTVRLWDHAT 173          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: STRAP_BOVIN (Serine-threonine kinase receptor-associated protein OS=Bos taurus GN=STRAP PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 53/178 (29.78%), Postives = 86/178 (48.31%), Query Frame = 3
Query:  102 PILMKGHERPLTYLKYN---EDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTET 626
            P+   GH RP+  L ++     G  L S  KD  P +   D G+ +GT+ GH GAVW   +++D+    T +AD TAK+W+  +G +L T       ++VDF        + T    +L     + +   +P + SG +          I +A+W   ++ I+SA +D  VR+WD  T
Sbjct:    7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSN--YLLTGGQDKLLRIYDLNKPEAEPKEISGHT--------SGIKKALWCSEDKQILSA-DDKTVRLWDHAT 173          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: STRAP_MOUSE (Serine-threonine kinase receptor-associated protein OS=Mus musculus GN=Strap PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.464e-15
Identity = 53/178 (29.78%), Postives = 86/178 (48.31%), Query Frame = 3
Query:  102 PILMKGHERPLTYLKYN---EDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTET 626
            P+   GH RP+  L ++     G  L S  KD  P +   D G+ +GT+ GH GAVW   +++D+    T +AD TAK+W+  +G +L T       ++VDF        + T    +L     + +   +P + SG +          I +A+W   ++ I+SA +D  VR+WD  T
Sbjct:    7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSN--YLLTGGQDKLLRIYDLNKPEAEPKEISGHT--------SGIKKALWCSDDKQILSA-DDKTVRLWDHAT 173          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15
Identity = 55/195 (28.21%), Postives = 87/195 (44.62%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETG--AQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            + GH   +  L +N  G+ + + + DHT TVW AD G ++ T  GH   +     + D   ++TGS D+T KLW+   G      T + D    S     G  +A  + D    + SA             + E V  L+G +G I++  + P    +++   D   RIWD +TG+ L+  +   GH   I S A
Sbjct:  215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA------------ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLE---GHTDEIFSCA 394          

HSP 2 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 48/176 (27.27%), Postives = 76/176 (43.18%), Query Frame = 3
Query:  108 LMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRD-SMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGK 632
            +++ H  PLT +  N+ G    + + D T  +W   +GE L T  GH   V+    +      + TGS D+T KLW+VETG    TF   +           ++  ++ +P   L +   +   A     QSGE V  L G    I    +      II+   D  V +W+ +TG+
Sbjct:   87 VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTA----------EIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGR 252          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14
Identity = 59/196 (30.10%), Postives = 92/196 (46.94%), Query Frame = 3
Query:  108 LMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAVGDK-LAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            +++GH  P+   ++  D   L SC++D +   W   +      Y+GH   VW  D+S  S+   +GS D+TA+LW+ +    L  +    +    V F      LA  +TD  + L SA            Q G SV +  G +G +    + P  + + SAGED  +++WD  +G L KE     GH  +ITSLA
Sbjct:  337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA------------QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL---RGHTDSITSLA 517          
The following BLAST results are available for this feature:
BLAST of CN189515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EIF3I_YEAS71.533e-2535.64Eukaryotic translation initiation factor 3 subunit... [more]
STRAP_DICDI3.095e-1828.73Serine-threonine kinase receptor-associated protei... [more]
STRAP_CHICK1.878e-1529.78Serine-threonine kinase receptor-associated protei... [more]
WDR69_HUMAN3.203e-1528.21WD repeat-containing protein 69 OS=Homo sapiens GN... [more]
STRAP_RAT4.184e-1529.78Serine-threonine kinase receptor-associated protei... [more]
STRAP_HUMAN4.184e-1529.78Serine-threonine kinase receptor-associated protei... [more]
STRAP_BOVIN4.184e-1529.78Serine-threonine kinase receptor-associated protei... [more]
STRAP_MOUSE5.464e-1529.78Serine-threonine kinase receptor-associated protei... [more]
WDR69_BOVIN7.136e-1528.21WD repeat-containing protein 69 OS=Bos taurus GN=W... [more]
TAF5L_MOUSE1.590e-1430.10TAF5-like RNA polymerase II p300/CBP-associated fa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189515 ID=CN189515; Name=CN189515; organism=Citrus sinensis; type=EST; length=689bp
AGGCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCGGAAACTCCATTCG
TCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAAAAGCAAGCATGAG
ACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACA
ACGAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGATCACACACCCACC
GTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCTACCGCGGCCACAA
CGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCGATGACGCTAATAA
CCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGTTGAAACAGGGGCT
CAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTCGACTTTGC
TGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAA
ACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCCTGCTGATCAGAGT
GGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAAGAATAAACAGAGC
AGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCTGGAGAAGATGCTA
TAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCTTAAAGAGTCGGAC
AAGGAAACTGGTCATAAAAAGACTATAACATCGCTTGCA
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