CN189515

Overview
NameCN189515
Unique NameCN189515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13
Identity = 54/195 (27.69%), Postives = 89/195 (45.64%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            ++GH+  +  +  + DG  + S + D T  +W  D G    T  GH  AV+    S D  T+ +G +D+T KLW    G  L T    +    +V F+  G  LA  ++D  ++L                SG+ ++ L G    +    + P  +TI +  ED  V++W  + GKLLK  +   GH+  + SL+
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWSRD-GRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDT------------TSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLN---GHQDWVNSLS 1246          

HSP 2 Score: 67.781 bits (164), Expect = 6.252e-11
Identity = 50/169 (29.59%), Postives = 77/169 (45.56%), Query Frame = 3
Query:  117 GHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFN-FDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWD 617
            GHE+ +  + ++ DG  L S + DH+  +W   +G+ L T  GH+  V     S D  T+  GS D+T KLW+ + G  L T N       S+ F+  G  LA  + D        I + RIA       G+ V  LKG    +    +    + I SA  D  +++W+
Sbjct: 1153 GHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASAD------KTIKLWRIA------DGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN 1309          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13
Identity = 54/186 (29.03%), Postives = 90/186 (48.39%), Query Frame = 3
Query:  117 GHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVI-TTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHK 668
            GH   ++ + ++ D   L S + D T  VW   +G+ L T +GH+  V+CCD +  S  +++GS D++ K+W V+TG  L T +  S P  +V+F     L V  + D    +  A   + +    AD+    V  +K          + P  + I++A  D  +++WD   G+ LK     TGHK
Sbjct:   79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLR-TLADEGNPPVSFVK----------FSPNGKYILTATLDNTLKLWDYSRGRCLK---TYTGHK 250          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13
Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 3
Query:  117 GHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVI-TTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHK 668
            GH   ++ + ++ D   L S + D T  +W   +G+ L T +GH+  V+CCD +  S  +++GS D++ K+W V+TG  L T +  S P  +V F     L V  + D    +  A   + +    AD+    V  +K          + P  + I++A  D+ +++WD   G+ LK     TGHK
Sbjct:   79 GHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLR-TLADEGNPPVSFVK----------FSPNGKYILTATLDSTLKLWDYSRGRCLK---TYTGHK 250          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 51/197 (25.89%), Postives = 88/197 (44.67%), Query Frame = 3
Query:  105 ILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP-ARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            ++ +GH   + ++ ++ DG++L SC  D    +W   +G  + T  GH   V+      D  TL + S D+T KLW+++ G  L T    +   R V F+  G+ LA    D  ++L                 G+ +  LK   G +    +    +T+ S   D  ++IW+  TG+ LK      GH  ++ S+A
Sbjct:  678 LICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDV------------SQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLK---TYIGHTNSVYSIA 859          

HSP 2 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 50/179 (27.93%), Postives = 80/179 (44.69%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAVGDKLAVI-TTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            + GH   +  + ++ DG+ L S A DHT  +W    G+ L T + H G V     S D  TL +GS D+T K+WN  TG  L T+    +   S+ ++   K+ V  + D  ++L               Q+   +  L G    +    + P  +T+     D  VR+W+  TG+ LK
Sbjct:  764 LTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDC------------QTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLK 930          

HSP 3 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 56/201 (27.86%), Postives = 83/201 (41.29%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQS--------GESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            ++GH   +  + ++ D   L S + D +  +W    G+       H   V+          + TGSAD T KLWN+ TG  L T +  S          DK+  +   P  +L        +A   ADQS        G  V IL+G   R+  A++ P    I +   D  V+IWD + GK LK     TGH   +  +A
Sbjct:  974 LEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHS----------DKILGMAWSPDGQL--------LASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTL---TGHTNWVFDIA 1153          

HSP 4 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 54/195 (27.69%), Postives = 87/195 (44.62%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP-ARSVDF-AVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            + GHE  +  + ++ DG+ L S + D T  +W   +G  L T  GH   V C   S D  TL + +AD T KLW+V  G  L T    +   RSV F A G  LA  + D  +++ +              +GE +    G    +    + P ++ ++S   D  +++WD +T   +K      GH   + S+A
Sbjct:  722 LTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNY------------HTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLH---GHTNEVCSVA 901          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 53/187 (28.34%), Postives = 92/187 (49.20%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHK 668
            + GH+  ++ + ++ D  LL S + D T  VW    G+ L T +GH+  V+CC+ +  S  +++GS D++ ++W+V TG  L T    S P  +V F     L V         +S   + RI    + Q  ++++    P   ++   + P  + I++A  D  +++WD   GK LK     TGHK
Sbjct:  110 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYTGHK 283          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 3
Query:  117 GHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHK 668
            GH   ++ + ++ D   L S + D T  +W   +G+ L T +GH+  V+CC+ +  S  +I+GS D+T K+W V+TG  L T +  S P  +V F     L V          S   + RI    + Q  ++++    P   ++   + P  + I++A  D  +++WD   G+ LK     TGHK
Sbjct:   81 GHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIV--------SGSYDGLCRIWDAASGQCLKTLVDDDNPP--VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLK---TYTGHK 252          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 52/197 (26.40%), Postives = 85/197 (43.15%), Query Frame = 3
Query:  105 ILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETG--AQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689
            + + GH   +  L ++  GD + + + DHT  VW A  G ++ T  GH   +     S D   ++TGS D+T  LW+  +G      T + D    S     G  +A  + D    + +A   K I              L+G +G I++  + P    +++   D   RIWD +TG+ L+  +   GH   I S A
Sbjct:  213 VTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITK------------LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLE---GHTDEIFSCA 394          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 48/178 (26.97%), Postives = 91/178 (51.12%), Query Frame = 3
Query:  111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641
            + GH+  ++ + ++ D +LL S + D T  +W   +G+ L T +GH+  V+CC+ +  S  +++GS D++ ++W+V+TG  L T    S P  +V F     L V         +S   + RI    + Q  ++++    P   ++   + P  + I++A  D  +++WD   GK LK
Sbjct:   83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 3
Query:  117 GHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHK 668
            GH   ++ + ++ D   L S + D T  +W   +G+ L T +GH+  V+CC+ +  S  +I+GS D+T K+W V+TG  L T +  S P  +V F     L V          S   + RI    + Q  ++++    P   ++   + P  + I++A  D  +++WD   G+ LK     TGHK
Sbjct:   81 GHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIV--------SGSYDGLCRIWDAASGQCLKTLVDDDNPP--VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLK---TYTGHK 252          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 51/198 (25.76%), Postives = 89/198 (44.95%), Query Frame = 3
Query:   96 MRPILMKGHE-RPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            M   +++GHE   +T ++ ++D  +L + + D+T  VW  D GE + T  GH G VW   +S+    +++GS D+T K+W+   G+ L T    +         G  L   + D  + +               +SG  +  L G    +    +     T++S G D  V+IW+  TG+ ++     TGH   + SL
Sbjct:  246 MGSAVLRGHEDHVITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDV------------ESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTL---TGHNNRVYSL 424          
The following BLAST results are available for this feature:
BLAST of CN189515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
Y2124_ANASP3.916e-1327.69Uncharacterized WD repeat-containing protein all21... [more]
WDR5B_MOUSE5.114e-1329.03WD repeat-containing protein 5B OS=Mus musculus GN... [more]
WDR5B_RAT6.679e-1328.49WD repeat-containing protein 5B OS=Rattus norvegic... [more]
Y2800_ANASP8.723e-1325.89Uncharacterized WD repeat-containing protein alr28... [more]
WDS_DROME1.139e-1228.34Protein will die slowly OS=Drosophila melanogaster... [more]
WDR5B_HUMAN1.139e-1228.65WD repeat-containing protein 5B OS=Homo sapiens GN... [more]
WDR69_RAT1.488e-1226.40WD repeat-containing protein 69 OS=Rattus norvegic... [more]
WDR5_XENTR1.488e-1226.97WD repeat-containing protein 5 OS=Xenopus tropical... [more]
WDR5B_PONAB1.488e-1228.65WD repeat-containing protein 5B OS=Pongo abelii PE... [more]
SEL10_CAEEL1.488e-1225.76F-box/WD repeat-containing protein sel-10 OS=Caeno... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189515 ID=CN189515; Name=CN189515; organism=Citrus sinensis; type=EST; length=689bp
AGGCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCGGAAACTCCATTCG
TCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAAAAGCAAGCATGAG
ACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACA
ACGAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGATCACACACCCACC
GTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCTACCGCGGCCACAA
CGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCGATGACGCTAATAA
CCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGTTGAAACAGGGGCT
CAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTCGACTTTGC
TGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAA
ACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCCTGCTGATCAGAGT
GGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAAGAATAAACAGAGC
AGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCTGGAGAAGATGCTA
TAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCTTAAAGAGTCGGAC
AAGGAAACTGGTCATAAAAAGACTATAACATCGCTTGCA
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