CN189515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 53/197 (26.90%), Postives = 86/197 (43.65%), Query Frame = 3 Query: 105 ILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDF-AVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689 + + GH + L +N GD L + + DHT +VW +G R+ T GH G + + D + T S D++ KLW+ G + T + V F + G +A + D + SA K +A L+G +G I++ + I++A D R+W+ TG+ L+ GH I S A Sbjct: 213 LTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAK------------LEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVL---KGHTDEIFSCA 394 HSP 2 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 53/193 (27.46%), Postives = 83/193 (43.01%), Query Frame = 3 Query: 108 LMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRD-SMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITS 683 +++ H PLT + +N+ G + + D T VW +GE L T GH V+ + + TGS D+T KLW+ ETG TF A V A + +I T +++ + I QSGE L L G I + +I+ D V +W+ +G+ + GH+ I+S Sbjct: 87 VLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFR-GHTAEIVCLAFNPQSTLIATG---SMDTTAKLWDI------QSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTL---IGHRGEISS 266 HSP 3 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 52/192 (27.08%), Postives = 90/192 (46.88%), Query Frame = 3 Query: 111 MKGHERPLTYLKYNED-GDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFN-FDSPARSVDF-AVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTI 677 ++GH + +++N GD + + + D T +W A+ G+ T+RGH + C + S + TGS D TAKLW++++G + T + + S+ F GD+L + D H + P SG + L G +G I+ A + I +A D ++WD+ GK + TGH+ + Sbjct: 130 LEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFD---------HTVSVWEIP---SGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATL---TGHEDEV 306
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 52/177 (29.38%), Postives = 82/177 (46.33%), Query Frame = 3 Query: 111 MKGHERPLTYLKYNED-GDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLL 638 ++GH + + +N GD + + + D T +W A+ G+ T+RGH + C + S + TGS D TAKLW+VE+G ++ T + FA L TT + S H + P SG V +L G +G I+ + I +A D ++WD E G+ L Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTL-------AGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVP---SGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCL 296
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 60/202 (29.70%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 99 RPIL----MKGHERP-LTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686 RPI+ ++GHE +T ++ + D LL + + D+T VW D+GE T GH+G VW +S+ +++GS D+T K+W E G L T S R + A TT + + V I ++G V L+G Q + + ++S G D V+IWD +GK L+ GH + SL Sbjct: 245 RPIMGSAILRGHEEHVITCMQIHND--LLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMA-------NTTLVTGSRDCTLRVWDI------ETGLHVRTLQGHQAAVRCVQFD--GNIVVSGGYDFTVKIWDAFSGKCLRTL---IGHSNRVYSL 426
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11 Identity = 49/180 (27.22%), Postives = 81/180 (45.00%), Query Frame = 3 Query: 111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP---ARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLK 641 + GH + + +K++ DG LL S + D T +W A G R+ T GH+ V + + L T + D + KLW+ ETGA L T + + D A G LA + D + L +SG + + + A + ++++ D ++R+WDT+TG LK Sbjct: 36 LSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDV------------RSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLK 203
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: SNR40_HUMAN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens GN=SNRNP40 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 61/233 (26.18%), Postives = 92/233 (39.48%), Query Frame = 3 Query: 111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLI-TGSADQTAKLWNVETGAQLFTFNFDSPARSVDF-AVGDKLAVITTDPFMEL----------NSAIHVKRIAGDPADQSGESVL---------------------ILKGPQGRIN-------RAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689 +KGH + L YN DG +LFS + D T VW ++ GER+ +GH V C +R L+ TGS D T KLW++ A + TF +V F D++ D +++ H + G G +L +K QG ++ R W P I + D V +WDT + ++L K GH +I +A Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILY---KLPGHAGSINEVA 334
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: SCON2_NEUCR (Sulfur controller 2 OS=Neurospora crassa GN=scon-2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 50/193 (25.91%), Postives = 88/193 (45.60%), Query Frame = 3 Query: 108 LMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686 ++KGHE +T L+ D ++L + + D T +W + E + T GH + D LI+GS D T K+WN TG L TF + + G LA ++D +++ D + + LKG +N +RT+ SA +D +++WD +T ++++ + GH + + L Sbjct: 289 VLKGHENGVTCLQL--DDNILATGSYDTTIKIWNIETEECIRTLVGHTAGIRALQF--DDSKLISGSLDHTIKVWNWHTGECLSTFAAHTDSVISVHFDGHLLASGSSDKTVKI-------------FDFNSKETYCLKGHSDWVNSTHVDIKSRTVFSASDDTTIKLWDLDTRQVIRTYEGHVGHVQQVLIL 464
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 61/233 (26.18%), Postives = 92/233 (39.48%), Query Frame = 3 Query: 111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLI-TGSADQTAKLWNVETGAQLFTFNFDSPARSVDF-AVGDKLAVITTDPFMEL----------NSAIHVKRIAGDPADQSGESVL---------------------ILKGPQGRIN-------RAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689 +KGH + L YN DG +LFS + D T VW ++ GER+ +GH V C +R L+ TGS D T KLW++ A + TF +V F D++ D +++ H + G G +L +K QG ++ R W P I + D V +WDT + ++L K GH +I +A Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLY---KLPGHAGSINEVA 335
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: SNR40_BOVIN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus GN=SNRNP40 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 62/233 (26.61%), Postives = 92/233 (39.48%), Query Frame = 3 Query: 111 MKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLI-TGSADQTAKLWNVETGAQLFTFNFDSPARSVDF-AVGDKLAVITTDPFMEL-----NSAIHVKRIAGDPA---DQSGESVLILKGP-----------------------QGRIN-------RAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSLA 689 +KGH + L YN DG +LFS + D T VW ++ GER+ +GH V C +R L+ TGS D T KLW++ A + TF +V F D++ D +++ N + R D S E +L QG ++ R W P I + D V +WDT + ++L K GH +I +A Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILY---KLPGHAGSINEVA 335
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: FBXW7_MOUSE (F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 57/205 (27.80%), Postives = 93/205 (45.37%), Query Frame = 3 Query: 102 PILMKGHE-RPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFT-FNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPAD--------QSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686 P ++KGH+ +T L++ G+ + S + D+T VW A G+ L T GH G VW + RD++ +I+GS D+T K+WN ETG + T + S R + +H KR+ D ++G+ + +L G + + R ++S D +V++WD ET L GH + SL Sbjct: 295 PKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH---------------------LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ---GHTNRVYSL 469
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: FBXW7_HUMAN (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 57/205 (27.80%), Postives = 93/205 (45.37%), Query Frame = 3 Query: 102 PILMKGHE-RPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFT-FNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPAD--------QSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686 P ++KGH+ +T L++ G+ + S + D+T VW A G+ L T GH G VW + RD++ +I+GS D+T K+WN ETG + T + S R + +H KR+ D ++G+ + +L G + + R ++S D +V++WD ET L GH + SL Sbjct: 373 PKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH---------------------LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ---GHTNRVYSL 547 The following BLAST results are available for this feature:
BLAST of CN189515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189515 ID=CN189515; Name=CN189515; organism=Citrus sinensis; type=EST; length=689bpback to top |